RNA–Protein interactions for RNA: ENST00000589502.5

CACNA2D4-225, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-225ENST00000589502 TRANK1O15050 2925 aa15.29■□□□□ 0.04
CACNA2D4-225ENST00000589502 STAU1O95793 577 aaKnown RBP15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 FOSL2P15408 326 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 TYMPP19971 482 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 IGFBP6P24592 240 aaPredicted RBP15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 AARSP49588 968 aaKnown RBP eCLIP15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 NOP14P78316 857 aaKnown RBP15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 DSG1Q02413 1049 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 NCAPHQ15003 741 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 IQCB1Q15051 598 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 KRT31Q15323 416 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 PSMD5Q16401 504 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 FILIP1LQ4L180 1135 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 RTP2Q5QGT7 225 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 VARS2Q5ST30 1063 aaKnown RBP15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 FKBP15Q5T1M5 1219 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 OVOS1Q6IE37 1185 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 ZNF280DQ6N043 979 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 DPH6Q7L8W6 267 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 RNF168Q8IYW5 571 aaPredicted RBP15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 TMEM86AQ8N2M4 240 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 TOP6BLQ8N6T0 577 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 CXorf38Q8TB03 319 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 AUTS2Q8WXX7 1259 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 MYLIPQ8WY64 445 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 PIK3R5Q8WYR1 880 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 CDX2Q99626 313 aaPredicted RBP15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 PI4K2AQ9BTU6 479 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 VPS16Q9H269 839 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 NDST4Q9H3R1 872 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 NSUN3Q9H649 340 aaKnown RBP15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 CHST7Q9NS84 486 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 GDAP2Q9NXN4 497 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 TIMM13Q9Y5L4 95 aaPredicted RBP15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 PLXNA3P51805 1871 aa15.28■□□□□ 0.04
CACNA2D4-225ENST00000589502 CHD7Q9P2D1 2997 aa15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 ASS1P00966 412 aaKnown RBP15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 ADH1AP07327 375 aa15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 TRIM21P19474 475 aaKnown RBP15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 IRS1P35568 1242 aa15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 PTPN14Q15678 1187 aa15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 CTXN3Q4LDR2 81 aa15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 KIAA0319Q5VV43 1072 aa15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 PRSS55Q6UWB4 352 aaPredicted RBP15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 SCARA5Q6ZMJ2 495 aa15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 GBP6Q6ZN66 633 aa15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 GPR65Q8IYL9 337 aa15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 ADGRF2Q8IZF7 708 aa15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 MRPL43Q8N983 215 aaKnown RBP15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 OXCT2Q9BYC2 517 aaPredicted RBP15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 DNAI2Q9GZS0 605 aa15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 SNX25Q9H3E2 840 aa15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 TLE6Q9H808 572 aa15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 VRTNQ9H8Y1 702 aa15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 GCNT4Q9P109 453 aa15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 COQ4Q9Y3A0 265 aa15.27■□□□□ 0.04
CACNA2D4-225ENST00000589502 FSD2A1L4K1 749 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 C2orf71A6NGG8 1288 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 FSCN2O14926 492 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 PMM2O15305 246 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 EFEMP2O95967 443 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 SERPINC1P01008 464 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 KLRC2P26717 231 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 NDUFV1P49821 464 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 COPB1P53618 953 aaKnown RBP15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 LRMPQ12912 555 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 CAMK1Q14012 370 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 WSCD1Q658N2 575 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 SCARA3Q6AZY7 606 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 SPOPLQ6IQ16 392 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 RBM23Q86U06 439 aaKnown RBP15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 GLYCTKQ8IVS8 523 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 RNF214Q8ND24 703 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 NT5C1BQ96P26 610 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 NIF3L1Q9GZT8 377 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 XYLT2Q9H1B5 865 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 MTMR10Q9NXD2 777 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 LIMA1Q9UHB6 759 aaKnown RBP15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 IRAK3Q9Y616 596 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 MTCH2Q9Y6C9 303 aa15.26■□□□□ 0.03
CACNA2D4-225ENST00000589502 GTPBP10A4D1E9 387 aaKnown RBP15.25■□□□□ 0.03
CACNA2D4-225ENST00000589502 SPDYE4A6NLX3 237 aa15.25■□□□□ 0.03
CACNA2D4-225ENST00000589502 HIDE1A8MVS5 230 aa15.25■□□□□ 0.03
CACNA2D4-225ENST00000589502 CYP11A1P05108 521 aa15.25■□□□□ 0.03
CACNA2D4-225ENST00000589502 CPB1P15086 417 aa15.25■□□□□ 0.03
CACNA2D4-225ENST00000589502 ZNF18P17022 549 aa15.25■□□□□ 0.03
CACNA2D4-225ENST00000589502 POU3F3P20264 500 aaPredicted RBP15.25■□□□□ 0.03
CACNA2D4-225ENST00000589502 LHX1P48742 406 aa15.25■□□□□ 0.03
CACNA2D4-225ENST00000589502 ARPP19P56211 112 aa15.25■□□□□ 0.03
CACNA2D4-225ENST00000589502 ADGRE1Q14246 886 aa15.25■□□□□ 0.03
CACNA2D4-225ENST00000589502 EXOC3L4Q17RC7 722 aa15.25■□□□□ 0.03
CACNA2D4-225ENST00000589502 ELMSAN1Q6PJG2 1045 aa15.25■□□□□ 0.03
CACNA2D4-225ENST00000589502 PPFIBP1Q86W92 1011 aa15.25■□□□□ 0.03
CACNA2D4-225ENST00000589502 PDCL2Q8N4E4 241 aa15.25■□□□□ 0.03
CACNA2D4-225ENST00000589502 EHBP1Q8NDI1 1231 aa15.25■□□□□ 0.03
CACNA2D4-225ENST00000589502 OR6B3Q8NGW1 331 aa15.25■□□□□ 0.03
CACNA2D4-225ENST00000589502 LNX1Q8TBB1 728 aaPredicted RBP15.25■□□□□ 0.03
CACNA2D4-225ENST00000589502 SPATA18Q8TC71 538 aa15.25■□□□□ 0.03
CACNA2D4-225ENST00000589502 SEMA4DQ92854 862 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms