RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 ADCY1Q08828 1119 aa15.2■□□□□ 0.02
CLPTM1-210ENST00000589158 PSMD6Q15008 389 aa15.2■□□□□ 0.02
CLPTM1-210ENST00000589158 GRASPQ7Z6J2 395 aaPredicted RBP15.2■□□□□ 0.02
CLPTM1-210ENST00000589158 WDR49Q8IV35 697 aa15.2■□□□□ 0.02
CLPTM1-210ENST00000589158 PLCD3Q8N3E9 789 aa15.2■□□□□ 0.02
CLPTM1-210ENST00000589158 LRRC52Q8N7C0 313 aa15.2■□□□□ 0.02
CLPTM1-210ENST00000589158 C1QTNF1Q9BXJ1 281 aa15.2■□□□□ 0.02
CLPTM1-210ENST00000589158 KCTD10Q9H3F6 313 aa15.2■□□□□ 0.02
CLPTM1-210ENST00000589158 RMND1Q9NWS8 449 aa15.2■□□□□ 0.02
CLPTM1-210ENST00000589158 HOOK1Q9UJC3 728 aaKnown RBP15.2■□□□□ 0.02
CLPTM1-210ENST00000589158 USTQ9Y2C2 406 aa15.2■□□□□ 0.02
CLPTM1-210ENST00000589158 C5orf42Q9H799 3197 aa15.2■□□□□ 0.02
CLPTM1-210ENST00000589158 CITO14578 2027 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 CALUO43852 315 aaPredicted RBP15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 GADD45BO75293 160 aaPredicted RBP15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 PRPF40AO75400 957 aaKnown RBP15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 SMC2O95347 1197 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 PAPLNO95428 1278 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 SEC24AO95486 1093 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 LRG1P02750 347 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 NR3C1P04150 777 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 CYP11A1P05108 521 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 WSCD1Q658N2 575 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 SCARA3Q6AZY7 606 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 RNF19BQ6ZMZ0 732 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 RTL10Q7L3V2 364 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 TCEAL8Q8IYN2 117 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 THEM5Q8N1Q8 247 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 BORCS6Q96GS4 357 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 TIGD1Q96MW7 591 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 PGLYRP2Q96PD5 576 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 CGRRF1Q99675 332 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 LIMD1Q9UGP4 676 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 AFF4Q9UHB7 1163 aaKnown RBP15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 SIX4Q9UIU6 781 aa15.19■□□□□ 0.02
CLPTM1-210ENST00000589158 KINO60870 393 aaKnown RBP15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 HUS1O60921 280 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 FSHRP23945 695 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 NTHL1P78549 312 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 MYO1EQ12965 1108 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 MYBPC2Q14324 1141 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 CEP135Q66GS9 1140 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 GET4Q7L5D6 327 aaPredicted RBP15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 TRAPPC11Q7Z392 1133 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 SLC9A9Q8IVB4 645 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 SMYD4Q8IYR2 804 aaPredicted RBP15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 ZDHHC14Q8IZN3 488 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 GUF1Q8N442 669 aaKnown RBP15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 CXorf38Q8TB03 319 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 ERCC4Q92889 916 aaPredicted RBP15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 SMARCE1Q969G3 411 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 HPDLQ96IR7 371 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 MFSD14AQ96MC6 490 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 DMAC2Q9NW81 257 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 HCFC1R1Q9NWW0 138 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 MAFFQ9ULX9 164 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 INSL5Q9Y5Q6 135 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 SNX9Q9Y5X1 595 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 PLXNA3P51805 1871 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 TRIP11Q15643 1979 aa15.18■□□□□ 0.02
CLPTM1-210ENST00000589158 FAM86C2PA6NEL3 165 aa15.17■□□□□ 0.02
CLPTM1-210ENST00000589158 CASP4P49662 377 aa15.17■□□□□ 0.02
CLPTM1-210ENST00000589158 GPR17Q13304 367 aa15.17■□□□□ 0.02
CLPTM1-210ENST00000589158 PTPN21Q16825 1174 aa15.17■□□□□ 0.02
CLPTM1-210ENST00000589158 OR10T2Q8NGX3 314 aa15.17■□□□□ 0.02
CLPTM1-210ENST00000589158 TMEM209Q96SK2 561 aa15.17■□□□□ 0.02
CLPTM1-210ENST00000589158 DNMT3BQ9UBC3 853 aaKnown RBP15.17■□□□□ 0.02
CLPTM1-210ENST00000589158 TRAF3IP3Q9Y228 551 aa15.17■□□□□ 0.02
CLPTM1-210ENST00000589158 FRMD4BQ9Y2L6 1034 aa15.17■□□□□ 0.02
CLPTM1-210ENST00000589158 PCDHA5Q9Y5H7 936 aa15.17■□□□□ 0.02
CLPTM1-210ENST00000589158 VWA8A3KMH1 1905 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 N4BP1O75113 896 aaKnown RBP15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 PHACTR2O75167 634 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 ASGR2P07307 311 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 POU2F2P09086 479 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 CDR1P51861 262 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 TWF1Q12792 350 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 DUSP4Q13115 394 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 TRPC3Q13507 836 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 PABPC1LQ4VXU2 614 aaKnown RBP15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 SLC39A12Q504Y0 691 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 TMEM31Q5JXX7 168 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 ELMOD1Q8N336 334 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 PDCL2Q8N4E4 241 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 ZNF516Q92618 1163 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 EDAQ92838 391 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 GSDMAQ96QA5 445 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 MYADMQ96S97 322 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 RTP3Q9BQQ7 232 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 GDAP2Q9NXN4 497 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 L1RE1Q9UN81 338 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 SLC27A5Q9Y2P5 690 aa15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 PDCD11Q14690 1871 aaKnown RBP15.16■□□□□ 0.02
CLPTM1-210ENST00000589158 MTMR11A4FU01 709 aa15.15■□□□□ 0.02
CLPTM1-210ENST00000589158 CLSTN1O94985 981 aa15.15■□□□□ 0.02
CLPTM1-210ENST00000589158 CST3P01034 146 aaPredicted RBP15.15■□□□□ 0.02
CLPTM1-210ENST00000589158 PTPN2P17706 415 aa15.15■□□□□ 0.02
CLPTM1-210ENST00000589158 NR2F2P24468 414 aa15.15■□□□□ 0.02
CLPTM1-210ENST00000589158 RPL13P26373 211 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms