RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 NFASCO94856 1347 aa7.75□□□□□ -1.17
TPM4-210ENST00000588507 NIPBLQ6KC79 2804 aaeCLIP7.74□□□□□ -1.176e-6■■■□□ 16.7
TPM4-210ENST00000588507 KNL1Q8NG31 2342 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 KIAA1549LQ6ZVL6 1849 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 A0A087WZ62 844 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 A0A1W2PRU2 124 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 ENC1O14682 589 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 DXOO77932 396 aaKnown RBP7.74□□□□□ -1.17
TPM4-210ENST00000588507 FGRP09769 529 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 PARP1P09874 1014 aaKnown RBP7.74□□□□□ -1.17
TPM4-210ENST00000588507 MAOBP27338 520 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 USP11P51784 963 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 FOSBP53539 338 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 SEC13P55735 322 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 INAVAQ3KP66 663 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 TRIM68Q6AZZ1 485 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 ABHD15Q6UXT9 468 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 TRMT1LQ7Z2T5 733 aaKnown RBP7.74□□□□□ -1.17
TPM4-210ENST00000588507 CCDC60Q8IWA6 550 aaPredicted RBP7.74□□□□□ -1.17
TPM4-210ENST00000588507 PNMA1Q8ND90 353 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 SMARCC2Q8TAQ2 1214 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 MTMR8Q96EF0 704 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 CCDC97Q96F63 343 aaPredicted RBP7.74□□□□□ -1.17
TPM4-210ENST00000588507 ZFRQ96KR1 1074 aaKnown RBP7.74□□□□□ -1.17
TPM4-210ENST00000588507 ZFP42Q96MM3 310 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 FDXACB1Q9BRP7 624 aaPredicted RBP7.74□□□□□ -1.17
TPM4-210ENST00000588507 KDM4CQ9H3R0 1056 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 CEP72Q9P209 647 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 ANAPC4Q9UJX5 808 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 CLCA2Q9UQC9 943 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 BACE2Q9Y5Z0 518 aa7.74□□□□□ -1.17
TPM4-210ENST00000588507 IPO5O00410 1097 aaKnown RBP7.73□□□□□ -1.17
TPM4-210ENST00000588507 RNF113AO15541 343 aaKnown RBP7.73□□□□□ -1.17
TPM4-210ENST00000588507 ABLIM3O94929 683 aa7.73□□□□□ -1.17
TPM4-210ENST00000588507 SEC24AO95486 1093 aa7.73□□□□□ -1.17
TPM4-210ENST00000588507 CHRM1P11229 460 aaPredicted RBP7.73□□□□□ -1.17
TPM4-210ENST00000588507 ATF2P15336 505 aa7.73□□□□□ -1.17
TPM4-210ENST00000588507 WEE1P30291 646 aa7.73□□□□□ -1.17
TPM4-210ENST00000588507 GJA4P35212 333 aa7.73□□□□□ -1.17
TPM4-210ENST00000588507 DCAF6Q58WW2 860 aa7.73□□□□□ -1.17
TPM4-210ENST00000588507 UBXN11Q5T124 520 aa7.73□□□□□ -1.17
TPM4-210ENST00000588507 STXBP5Q5T5C0 1151 aa7.73□□□□□ -1.17
TPM4-210ENST00000588507 SWSAP1Q6NVH7 229 aa7.73□□□□□ -1.17
TPM4-210ENST00000588507 USP53Q70EK8 1073 aa7.73□□□□□ -1.17
TPM4-210ENST00000588507 SMG8Q8ND04 991 aaKnown RBP7.73□□□□□ -1.17
TPM4-210ENST00000588507 RHPN1Q8TCX5 695 aa7.73□□□□□ -1.17
TPM4-210ENST00000588507 FOXJ1Q92949 421 aa7.73□□□□□ -1.17
TPM4-210ENST00000588507 VCPIP1Q96JH7 1222 aa7.73□□□□□ -1.17
TPM4-210ENST00000588507 MMS19Q96T76 1030 aa7.73□□□□□ -1.17
TPM4-210ENST00000588507 POLR3CQ9BUI4 534 aaPredicted RBP7.73□□□□□ -1.17
TPM4-210ENST00000588507 LY9Q9HBG7 655 aa7.73□□□□□ -1.17
TPM4-210ENST00000588507 AGPAT5Q9NUQ2 364 aa7.73□□□□□ -1.17
TPM4-210ENST00000588507 GEMIN8Q9NWZ8 242 aaKnown RBP7.73□□□□□ -1.17
TPM4-210ENST00000588507 ANAPC2Q9UJX6 822 aa7.73□□□□□ -1.17
TPM4-210ENST00000588507 EXOC6BQ9Y2D4 811 aa7.73□□□□□ -1.17
TPM4-210ENST00000588507 TDRD15B5MCY1 1934 aaKnown RBP7.73□□□□□ -1.17
TPM4-210ENST00000588507 MYO16Q9Y6X6 1858 aa7.72□□□□□ -1.17
TPM4-210ENST00000588507 IGHV1OR15-9A0A0B4J2B8 117 aa7.72□□□□□ -1.17
TPM4-210ENST00000588507 PCDHGA12O60330 932 aa7.72□□□□□ -1.17
TPM4-210ENST00000588507 PRAMEF12O95522 483 aa7.72□□□□□ -1.17
TPM4-210ENST00000588507 MPOP05164 745 aa7.72□□□□□ -1.17
TPM4-210ENST00000588507 CD97P48960 835 aa7.72□□□□□ -1.17
TPM4-210ENST00000588507 MRPS21P82921 87 aaKnown RBP7.72□□□□□ -1.17
TPM4-210ENST00000588507 BNC1Q01954 994 aa7.72□□□□□ -1.17
TPM4-210ENST00000588507 ROR1Q01973 937 aa7.72□□□□□ -1.17
TPM4-210ENST00000588507 TWF1Q12792 350 aa7.72□□□□□ -1.17
TPM4-210ENST00000588507 SART3Q15020 963 aaKnown RBP7.72□□□□□ -1.17
TPM4-210ENST00000588507 ZSCAN23Q3MJ62 389 aa7.72□□□□□ -1.17
TPM4-210ENST00000588507 DGKHQ86XP1 1220 aa7.72□□□□□ -1.17
TPM4-210ENST00000588507 DCBLD1Q8N8Z6 715 aa7.72□□□□□ -1.17
TPM4-210ENST00000588507 PIGOQ8TEQ8 1089 aa7.72□□□□□ -1.17
TPM4-210ENST00000588507 CUL5Q93034 780 aa7.72□□□□□ -1.17
TPM4-210ENST00000588507 MIB2Q96AX9 1013 aa7.72□□□□□ -1.17
TPM4-210ENST00000588507 DDX27Q96GQ7 796 aaKnown RBP7.72□□□□□ -1.17
TPM4-210ENST00000588507 NIFKQ9BYG3 293 aaKnown RBP7.72□□□□□ -1.17
TPM4-210ENST00000588507 KAT14Q9H8E8 782 aa7.72□□□□□ -1.17
TPM4-210ENST00000588507 KCNH7Q9NS40 1196 aa7.72□□□□□ -1.17
TPM4-210ENST00000588507 THSD1Q9NS62 852 aa7.72□□□□□ -1.17
TPM4-210ENST00000588507 CUEDC1Q9NWM3 386 aaPredicted RBP7.72□□□□□ -1.17
TPM4-210ENST00000588507 RP1L1Q8IWN7 2480 aaPredicted RBP7.71□□□□□ -1.17
TPM4-210ENST00000588507 CCDC168Q8NDH2 2452 aa7.71□□□□□ -1.17
TPM4-210ENST00000588507 TCRBV21S2A2A0A5A6 115 aa7.71□□□□□ -1.18
TPM4-210ENST00000588507 K7EQS6 105 aa7.71□□□□□ -1.18
TPM4-210ENST00000588507 NDUFS2O75306 463 aa7.71□□□□□ -1.18
TPM4-210ENST00000588507 ZNF217O75362 1048 aa7.71□□□□□ -1.18
TPM4-210ENST00000588507 KIF4AO95239 1232 aa7.71□□□□□ -1.18
TPM4-210ENST00000588507 LDOC1O95751 146 aaPredicted RBP7.71□□□□□ -1.18
TPM4-210ENST00000588507 DDAH2O95865 285 aa7.71□□□□□ -1.18
TPM4-210ENST00000588507 ZFYP08048 801 aaPredicted RBP7.71□□□□□ -1.18
TPM4-210ENST00000588507 ARSAP15289 507 aa7.71□□□□□ -1.18
TPM4-210ENST00000588507 FGFR3P22607 806 aa7.71□□□□□ -1.18
TPM4-210ENST00000588507 GABREP78334 506 aa7.71□□□□□ -1.18
TPM4-210ENST00000588507 GRIK3Q13003 919 aa7.71□□□□□ -1.18
TPM4-210ENST00000588507 DNAJC3Q13217 504 aa7.71□□□□□ -1.18
TPM4-210ENST00000588507 HSF5Q4G112 596 aaPredicted RBP7.71□□□□□ -1.18
TPM4-210ENST00000588507 ARHGAP15Q53QZ3 475 aa7.71□□□□□ -1.18
TPM4-210ENST00000588507 EOGTQ5NDL2 527 aa7.71□□□□□ -1.18
TPM4-210ENST00000588507 GPR158Q5T848 1215 aa7.71□□□□□ -1.18
TPM4-210ENST00000588507 SLC8B1Q6J4K2 584 aa7.71□□□□□ -1.18
TPM4-210ENST00000588507 MIS18BP1Q6P0N0 1132 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms