RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 KIAA0391O15091 583 aaKnown RBP5.58□□□□□ -1.52
VMP1-205ENST00000587470 NDUFS2O75306 463 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 ERN1O75460 977 aaKnown RBP5.58□□□□□ -1.52
VMP1-205ENST00000587470 PLA2G5P39877 138 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 SLC16A1P53985 500 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 NOMO3P69849 1222 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 NOMO2Q5JPE7 1267 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 Q6ZNX1 250 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 RSPH3Q86UC2 560 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 COLGALT2Q8IYK4 626 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 CBARPQ8N350 705 aaPredicted RBP5.58□□□□□ -1.52
VMP1-205ENST00000587470 SIMC1Q8NDZ2 872 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 TBC1D15Q8TC07 691 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 CAGE1Q8TC20 777 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 JADE3Q92613 823 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 ZNF764Q96H86 408 aaPredicted RBP5.58□□□□□ -1.52
VMP1-205ENST00000587470 BBC3Q96PG8 261 aaPredicted RBP5.58□□□□□ -1.52
VMP1-205ENST00000587470 C11orf54Q9H0W9 315 aaPredicted RBP5.58□□□□□ -1.52
VMP1-205ENST00000587470 CASS4Q9NQ75 786 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 TDP1Q9NUW8 608 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 COX11Q9Y6N1 276 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 SAMD9LQ8IVG5 1584 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 DIP2CQ9Y2E4 1556 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 ABCC1P33527 1531 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 MLH3Q9UHC1 1453 aa5.58□□□□□ -1.52
VMP1-205ENST00000587470 JCADQ9P266 1359 aa5.57□□□□□ -1.52
VMP1-205ENST00000587470 DNMT1P26358 1616 aaKnown RBP5.57□□□□□ -1.52
VMP1-205ENST00000587470 CDHR4A6H8M9 788 aa5.57□□□□□ -1.52
VMP1-205ENST00000587470 KLHL33A6NCF5 533 aa5.57□□□□□ -1.52
VMP1-205ENST00000587470 IARSP41252 1262 aaKnown RBP5.57□□□□□ -1.52
VMP1-205ENST00000587470 VAV2P52735 878 aa5.57□□□□□ -1.52
VMP1-205ENST00000587470 ACAP2Q15057 778 aa5.57□□□□□ -1.52
VMP1-205ENST00000587470 CCDC142Q17RM4 750 aa5.57□□□□□ -1.52
VMP1-205ENST00000587470 MIGA2Q7L4E1 593 aa5.57□□□□□ -1.52
VMP1-205ENST00000587470 HDAC10Q969S8 669 aa5.57□□□□□ -1.52
VMP1-205ENST00000587470 PTCD3Q96EY7 689 aaKnown RBP5.57□□□□□ -1.52
VMP1-205ENST00000587470 FAXDC2Q96IV6 333 aa5.57□□□□□ -1.52
VMP1-205ENST00000587470 UNKLQ9H9P5 680 aaKnown RBP5.57□□□□□ -1.52
VMP1-205ENST00000587470 ALG13Q9NP73 1137 aaKnown RBP5.57□□□□□ -1.52
VMP1-205ENST00000587470 HSFX1Q9UBD0 423 aa5.57□□□□□ -1.52
VMP1-205ENST00000587470 TUBD1Q9UJT1 453 aa5.57□□□□□ -1.52
VMP1-205ENST00000587470 DMTF1Q9Y222 760 aa5.57□□□□□ -1.52
VMP1-205ENST00000587470 PCDHA13Q9Y5I0 950 aa5.57□□□□□ -1.52
VMP1-205ENST00000587470 KDM5CP41229 1560 aa5.57□□□□□ -1.52
VMP1-205ENST00000587470 PLEKHH2Q8IVE3 1493 aa5.57□□□□□ -1.52
VMP1-205ENST00000587470 NPHP4O75161 1426 aaPredicted RBP5.57□□□□□ -1.52
VMP1-205ENST00000587470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.56□□□□□ -1.521e-14■■□□□ 11.5
VMP1-205ENST00000587470 SPATA31A6Q5VVP1 1343 aa5.56□□□□□ -1.52
VMP1-205ENST00000587470 SALL3Q9BXA9 1300 aa5.56□□□□□ -1.52
VMP1-205ENST00000587470 NEURL4Q96JN8 1562 aa5.56□□□□□ -1.52
VMP1-205ENST00000587470 SGTAO43765 313 aa5.56□□□□□ -1.52
VMP1-205ENST00000587470 HAUS5O94927 633 aa5.56□□□□□ -1.52
VMP1-205ENST00000587470 MTHFD1P11586 935 aaKnown RBP5.56□□□□□ -1.52
VMP1-205ENST00000587470 CDC42EP1Q00587 391 aa5.56□□□□□ -1.52
VMP1-205ENST00000587470 ZNF169Q14929 603 aaPredicted RBP5.56□□□□□ -1.52
VMP1-205ENST00000587470 RNF187Q5TA31 235 aaPredicted RBP5.56□□□□□ -1.52
VMP1-205ENST00000587470 SYDE2Q5VT97 1194 aa5.56□□□□□ -1.52
VMP1-205ENST00000587470 FBXO42Q6P3S6 717 aa5.56□□□□□ -1.52
VMP1-205ENST00000587470 SYCE2Q6PIF2 218 aa5.56□□□□□ -1.52
VMP1-205ENST00000587470 RD3Q7Z3Z2 195 aa5.56□□□□□ -1.52
VMP1-205ENST00000587470 NTN5Q8WTR8 489 aaPredicted RBP5.56□□□□□ -1.52
VMP1-205ENST00000587470 AIFM2Q9BRQ8 373 aa5.56□□□□□ -1.52
VMP1-205ENST00000587470 TLK1Q9UKI8 766 aa5.56□□□□□ -1.52
VMP1-205ENST00000587470 MED14O60244 1454 aa5.56□□□□□ -1.52
VMP1-205ENST00000587470 FGD6Q6ZV73 1430 aa5.56□□□□□ -1.52
VMP1-205ENST00000587470 SYNMO15061 1565 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 SETBP1Q9Y6X0 1596 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 SPAG9O60271 1321 aaKnown RBP5.55□□□□□ -1.52
VMP1-205ENST00000587470 SYCP2Q9BX26 1530 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 C5AR1P21730 350 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 YY1P25490 414 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 CD38P28907 300 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 RARRES1P49788 294 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 ELLP55199 621 aaPredicted RBP5.55□□□□□ -1.52
VMP1-205ENST00000587470 SLFN5Q08AF3 891 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 TARDBPQ13148 414 aaKnown RBP eCLIP5.55□□□□□ -1.52
VMP1-205ENST00000587470 PABPC1LQ4VXU2 614 aaKnown RBP5.55□□□□□ -1.52
VMP1-205ENST00000587470 SP5Q6BEB4 398 aaPredicted RBP5.55□□□□□ -1.52
VMP1-205ENST00000587470 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.55□□□□□ -1.52
VMP1-205ENST00000587470 LNX2Q8N448 690 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 DCBLD1Q8N8Z6 715 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 Q8NA96 180 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 IL17RDQ8NFM7 739 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 IFI44Q8TCB0 444 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 NELL1Q92832 810 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 VOPP1Q96AW1 172 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 TMX3Q96JJ7 454 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 DUSP26Q9BV47 211 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 R3HDMLQ9H3Y0 253 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 PRDM13Q9H4Q3 707 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 LRIT1Q9P2V4 623 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 CAMSAP2Q08AD1 1489 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 RTEL1-TNFRSF6BF6WH68 1400 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 ABCC5O15440 1437 aa5.55□□□□□ -1.52
VMP1-205ENST00000587470 MASP2O00187 686 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 GRM6O15303 877 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 PCDHGA12O60330 932 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 MT-CO1P00395 513 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 MYBL2P10244 700 aa5.54□□□□□ -1.52
VMP1-205ENST00000587470 SLC6A4P31645 630 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms