RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 OR10T2Q8NGX3 314 aa16.49■□□□□ 0.23
PRKCSH-204ENST00000587290 RMDN1Q96DB5 314 aa16.49■□□□□ 0.23
PRKCSH-204ENST00000587290 EPSTI1Q96J88 318 aa16.49■□□□□ 0.23
PRKCSH-204ENST00000587290 SENP8Q96LD8 212 aa16.49■□□□□ 0.23
PRKCSH-204ENST00000587290 LRRC3Q9BY71 257 aa16.49■□□□□ 0.23
PRKCSH-204ENST00000587290 OSBPL6Q9BZF3 934 aa16.49■□□□□ 0.23
PRKCSH-204ENST00000587290 KCNG1Q9UIX4 513 aa16.49■□□□□ 0.23
PRKCSH-204ENST00000587290 CPSF3Q9UKF6 684 aaKnown RBP16.49■□□□□ 0.23
PRKCSH-204ENST00000587290 CLIC4Q9Y696 253 aa16.49■□□□□ 0.23
PRKCSH-204ENST00000587290 CACNA1AO00555 2505 aa16.48■□□□□ 0.23
PRKCSH-204ENST00000587290 MTMR11A4FU01 709 aa16.48■□□□□ 0.23
PRKCSH-204ENST00000587290 KINO60870 393 aaKnown RBP16.48■□□□□ 0.23
PRKCSH-204ENST00000587290 LILRA4P59901 499 aa16.48■□□□□ 0.23
PRKCSH-204ENST00000587290 MTAPQ13126 283 aa16.48■□□□□ 0.23
PRKCSH-204ENST00000587290 DYMQ7RTS9 669 aa16.48■□□□□ 0.23
PRKCSH-204ENST00000587290 MAP4K3Q8IVH8 894 aa16.48■□□□□ 0.23
PRKCSH-204ENST00000587290 ZNF687Q8N1G0 1237 aa16.48■□□□□ 0.23
PRKCSH-204ENST00000587290 LARP4BQ92615 738 aaKnown RBP16.48■□□□□ 0.23
PRKCSH-204ENST00000587290 DNASE1L2Q92874 299 aa16.48■□□□□ 0.23
PRKCSH-204ENST00000587290 KCNN1Q92952 543 aa16.48■□□□□ 0.23
PRKCSH-204ENST00000587290 CLDN23Q96B33 292 aa16.48■□□□□ 0.23
PRKCSH-204ENST00000587290 FAM84AQ96KN4 292 aa16.48■□□□□ 0.23
PRKCSH-204ENST00000587290 SEMA4AQ9H3S1 761 aa16.48■□□□□ 0.23
PRKCSH-204ENST00000587290 ATG2BQ96BY7 2078 aa16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 HEPACAM2A8MVW5 462 aa16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 TULP1O00294 542 aaPredicted RBP16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 MICAL2O94851 1124 aa16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 ADRB2P07550 413 aa16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 PSMC3P17980 439 aa16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 LONP1P36776 959 aaKnown RBP16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 SOX9P48436 509 aa16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 WNT7BP56706 349 aa16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 GPR17Q13304 367 aa16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 TMEM132DQ14C87 1099 aa16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 CENPPQ6IPU0 288 aa16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 SFR1Q86XK3 245 aa16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 ZSWIM2Q8NEG5 633 aa16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 TTC8Q8TAM2 541 aa16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 LPIN3Q9BQK8 851 aa16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 FBXO4Q9UKT5 387 aa16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 PIAS3Q9Y6X2 628 aa16.47■□□□□ 0.23
PRKCSH-204ENST00000587290 OR6C75A6NL08 312 aa16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 SLC26A4O43511 780 aa16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 XPOTO43592 962 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 CENPBP07199 599 aaPredicted RBP16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 ODC1P11926 461 aa16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 EPHB3P54753 998 aa16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 GTF2BQ00403 316 aa16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 CEBPZQ03701 1054 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 KCNA1Q09470 495 aa16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 SCARA3Q6AZY7 606 aa16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 ADALQ6DHV7 355 aa16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 GAREM2Q75VX8 874 aa16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 BRAPQ7Z569 592 aa16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 EFCAB13Q8IY85 973 aa16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 STKLD1Q8NE28 680 aa16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 RUBCNQ92622 972 aa16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 ZFYVE19Q96K21 471 aa16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 CLIC6Q96NY7 704 aa16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 LRRC3BQ96PB8 259 aa16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 SEPT5Q99719 369 aaPredicted RBP16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 MKNK1Q9BUB5 465 aa16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 UPF2Q9HAU5 1272 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 TBC1D7Q9P0N9 293 aa16.46■□□□□ 0.23
PRKCSH-204ENST00000587290 ANO9A1A5B4 782 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 SLC38A8A6NNN8 435 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 ARNTLO00327 626 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 PIRO00625 290 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 ZNF263O14978 683 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 TYMPP19971 482 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 CCNE1P24864 410 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 RPS9P46781 194 aaKnown RBP16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 ALDH1A3P47895 512 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 MCM2P49736 904 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 CYP4F8P98187 520 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 PTPAQ15257 358 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 KYAT1Q16773 422 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 ZNF528Q3MIS6 628 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 SLC39A12Q504Y0 691 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 CRELD2Q6UXH1 353 aaPredicted RBP16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 MFSD6LQ8IWD5 586 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 LEMD2Q8NC56 503 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 FAM3CQ92520 227 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 IRF7Q92985 503 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 PYM1Q9BRP8 204 aaKnown RBP16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 CCSER1Q9C0I3 900 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 SMG9Q9H0W8 520 aaKnown RBP16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 PRMT8Q9NR22 394 aaPredicted RBP16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 RBM12Q9NTZ6 932 aaKnown RBP16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 FBXO2Q9UK22 296 aaPredicted RBP16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 AGO2Q9UKV8 859 aaKnown RBP16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 MAFFQ9ULX9 164 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 MRPS17Q9Y2R5 130 aaKnown RBP16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 SPTBN2O15020 2390 aa16.45■□□□□ 0.22
PRKCSH-204ENST00000587290 MYMKA6NI61 221 aa16.44■□□□□ 0.22
PRKCSH-204ENST00000587290 NCAM2O15394 837 aa16.44■□□□□ 0.22
PRKCSH-204ENST00000587290 PRAMEF12O95522 483 aa16.44■□□□□ 0.22
PRKCSH-204ENST00000587290 BMP15O95972 392 aa16.44■□□□□ 0.22
PRKCSH-204ENST00000587290 ATF6P18850 670 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms