RNA–Protein interactions for RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 SOX5P35711 763 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 SLC11A1P49279 550 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 JAM2P57087 298 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 KRT17Q04695 432 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 ARID5BQ14865 1188 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 SHHQ15465 462 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 PTPN21Q16825 1174 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 PDXDC1Q6P996 788 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 KCNT2Q6UVM3 1135 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 SCARA5Q6ZMJ2 495 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 CCDC112Q8NEF3 446 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 SHC3Q92529 594 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 BAP1Q92560 729 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 TMEM169Q96HH4 297 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 SENP8Q96LD8 212 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 SAMD11Q96NU1 681 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 DNAJC7Q99615 494 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.76■□□□□ 0.11
CALR-204ENST00000586967 CISHQ9NSE2 258 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 ABHD10Q9NUJ1 306 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 SPG21Q9NZD8 308 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 AIPL1Q9NZN9 384 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 PCDHB8Q9UN66 801 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 PRG3Q9Y2Y8 225 aaPredicted RBP15.76■□□□□ 0.11
CALR-204ENST00000586967 PCDHB4Q9Y5E5 795 aa15.76■□□□□ 0.11
CALR-204ENST00000586967 SCN1AP35498 2009 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.75■□□□□ 0.11
CALR-204ENST00000586967 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.75■□□□□ 0.11
CALR-204ENST00000586967 LRRC53A6NM62 1247 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 PPEF2O14830 753 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 EPHB6O15197 1021 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 CYP11A1P05108 521 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 USP8P40818 1118 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 FXR1P51114 621 aaKnown RBP eCLIP15.75■□□□□ 0.111e-18■■□□□ 13.4
CALR-204ENST00000586967 PTK2Q05397 1052 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 INCA1Q0VD86 236 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 BMS1Q14692 1282 aaKnown RBP15.75■□□□□ 0.11
CALR-204ENST00000586967 RAB30Q15771 203 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 ASIC2Q16515 512 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 GJB7Q6PEY0 223 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 VPS36Q86VN1 386 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 ADGRF2Q8IZF7 708 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 THEM5Q8N1Q8 247 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 COLGALT1Q8NBJ5 622 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 CLP1Q92989 425 aaKnown RBP15.75■□□□□ 0.11
CALR-204ENST00000586967 TNIP3Q96KP6 325 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 KREMEN1Q96MU8 473 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 PAAF1Q9BRP4 392 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 KIAA1257Q9ULG3 409 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 BARX2Q9UMQ3 279 aaPredicted RBP15.75■□□□□ 0.11
CALR-204ENST00000586967 POLIQ9UNA4 740 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 PCDHA11Q9Y5I1 949 aa15.75■□□□□ 0.11
CALR-204ENST00000586967 MRPL42Q9Y6G3 142 aaKnown RBP15.75■□□□□ 0.11
CALR-204ENST00000586967 LRRN2O75325 713 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 PAEPP09466 180 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 WARSP23381 471 aaKnown RBP15.74■□□□□ 0.11
CALR-204ENST00000586967 PCSK1P29120 753 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 HNRNPH3P31942 346 aaKnown RBP15.74■□□□□ 0.11
CALR-204ENST00000586967 ADKP55263 362 aaKnown RBP15.74■□□□□ 0.11
CALR-204ENST00000586967 APBA1Q02410 837 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 MLLT1Q03111 559 aaPredicted RBP15.74■□□□□ 0.11
CALR-204ENST00000586967 SOWAHAQ2M3V2 549 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 TIGD5Q53EQ6 642 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 C9orf50Q5SZB4 431 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 TMEM270Q6UE05 265 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.74■□□□□ 0.11
CALR-204ENST00000586967 CCDC186Q7Z3E2 898 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 LIMS2Q7Z4I7 341 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 TMCO2Q7Z6W1 182 aaPredicted RBP15.74■□□□□ 0.11
CALR-204ENST00000586967 FAM71AQ8IYT1 594 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 C3orf58Q8NDZ4 430 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 OR6B3Q8NGW1 331 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 IGSF21Q96ID5 467 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 PLVAPQ9BX97 442 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 NT5C1AQ9BXI3 368 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 SMYD3Q9H7B4 428 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 MSRAQ9UJ68 235 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 CNTN6Q9UQ52 1028 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 SSX2IPQ9Y2D8 614 aa15.74■□□□□ 0.11
CALR-204ENST00000586967 MKI67P46013 3256 aaKnown RBP15.74■□□□□ 0.11
CALR-204ENST00000586967 A8MXQ7 604 aa15.73■□□□□ 0.11
CALR-204ENST00000586967 H7C4K7 107 aa15.73■□□□□ 0.11
CALR-204ENST00000586967 FOXN3O00409 490 aaPredicted RBP15.73■□□□□ 0.11
CALR-204ENST00000586967 SPTLC1O15269 473 aa15.73■□□□□ 0.11
CALR-204ENST00000586967 MED7O43513 233 aa15.73■□□□□ 0.11
CALR-204ENST00000586967 CILPO75339 1184 aa15.73■□□□□ 0.11
CALR-204ENST00000586967 SERPING1P05155 500 aa15.73■□□□□ 0.11
CALR-204ENST00000586967 WEE2P0C1S8 567 aa15.73■□□□□ 0.11
CALR-204ENST00000586967 CD58P19256 250 aa15.73■□□□□ 0.11
CALR-204ENST00000586967 ANXA13P27216 316 aa15.73■□□□□ 0.11
CALR-204ENST00000586967 GNL1P36915 607 aaPredicted RBP15.73■□□□□ 0.11
CALR-204ENST00000586967 PDE6CP51160 858 aa15.73■□□□□ 0.11
CALR-204ENST00000586967 CDK17Q00537 523 aa15.73■□□□□ 0.11
CALR-204ENST00000586967 YWHAHQ04917 246 aaPredicted RBP15.73■□□□□ 0.11
CALR-204ENST00000586967 STILQ15468 1287 aa15.73■□□□□ 0.11
CALR-204ENST00000586967 FUT10Q6P4F1 479 aa15.73■□□□□ 0.11
CALR-204ENST00000586967 ZNF677Q86XU0 584 aa15.73■□□□□ 0.11
CALR-204ENST00000586967 TDHQ8IZJ6 230 aa15.73■□□□□ 0.11
CALR-204ENST00000586967 SLC39A11Q8N1S5 342 aa15.73■□□□□ 0.11
CALR-204ENST00000586967 PDCL2Q8N4E4 241 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms