RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 TIMM13Q9Y5L4 95 aaPredicted RBP19.8■□□□□ 0.76
TOP3A-220ENST00000585031 CYP46A1Q9Y6A2 500 aa19.8■□□□□ 0.76
TOP3A-220ENST00000585031 SMG1Q96Q15 3661 aaKnown RBP19.8■□□□□ 0.76
TOP3A-220ENST00000585031 ASCC3Q8N3C0 2202 aaKnown RBP19.79■□□□□ 0.76
TOP3A-220ENST00000585031 ABLIM1O14639 778 aa19.79■□□□□ 0.76
TOP3A-220ENST00000585031 NEMFO60524 1076 aa19.79■□□□□ 0.76
TOP3A-220ENST00000585031 AKAP3O75969 853 aa19.79■□□□□ 0.76
TOP3A-220ENST00000585031 KCNE1P15382 129 aa19.79■□□□□ 0.76
TOP3A-220ENST00000585031 DUSP4Q13115 394 aa19.79■□□□□ 0.76
TOP3A-220ENST00000585031 ZNF280DQ6N043 979 aa19.79■□□□□ 0.76
TOP3A-220ENST00000585031 TTC9BQ8N6N2 239 aa19.79■□□□□ 0.76
TOP3A-220ENST00000585031 NACC1Q96RE7 527 aa19.79■□□□□ 0.76
TOP3A-220ENST00000585031 DUSP15Q9H1R2 295 aaPredicted RBP19.79■□□□□ 0.76
TOP3A-220ENST00000585031 TUFT1Q9NNX1 390 aa19.79■□□□□ 0.76
TOP3A-220ENST00000585031 LHX6Q9UPM6 363 aa19.79■□□□□ 0.76
TOP3A-220ENST00000585031 NUB1Q9Y5A7 615 aa19.79■□□□□ 0.76
TOP3A-220ENST00000585031 OTOL1A6NHN0 477 aaPredicted RBP19.78■□□□□ 0.76
TOP3A-220ENST00000585031 C4orf47A7E2U8 309 aa19.78■□□□□ 0.76
TOP3A-220ENST00000585031 BTBD18B2RXH4 712 aa19.78■□□□□ 0.76
TOP3A-220ENST00000585031 DCLK1O15075 740 aa19.78■□□□□ 0.76
TOP3A-220ENST00000585031 SOAT2O75908 522 aa19.78■□□□□ 0.76
TOP3A-220ENST00000585031 CPB1P15086 417 aa19.78■□□□□ 0.76
TOP3A-220ENST00000585031 KRT2P35908 639 aa19.78■□□□□ 0.76
TOP3A-220ENST00000585031 ZNF252P-AS1Q0IIN9 211 aa19.78■□□□□ 0.76
TOP3A-220ENST00000585031 PLK5Q496M5 336 aa19.78■□□□□ 0.76
TOP3A-220ENST00000585031 FSTL4Q6MZW2 842 aa19.78■□□□□ 0.76
TOP3A-220ENST00000585031 POLR3CQ9BUI4 534 aaPredicted RBP19.78■□□□□ 0.76
TOP3A-220ENST00000585031 FBRSL1Q9HCM7 1045 aaKnown RBP19.78■□□□□ 0.76
TOP3A-220ENST00000585031 SLC38A7Q9NVC3 462 aa19.78■□□□□ 0.76
TOP3A-220ENST00000585031 CNTN3Q9P232 1028 aa19.78■□□□□ 0.76
TOP3A-220ENST00000585031 MAFFQ9ULX9 164 aa19.78■□□□□ 0.76
TOP3A-220ENST00000585031 SLC27A5Q9Y2P5 690 aa19.78■□□□□ 0.76
TOP3A-220ENST00000585031 ZNF638Q14966 1978 aaKnown RBP19.77■□□□□ 0.76
TOP3A-220ENST00000585031 KIAA1549LQ6ZVL6 1849 aa19.77■□□□□ 0.76
TOP3A-220ENST00000585031 TAF4O00268 1085 aa19.77■□□□□ 0.76
TOP3A-220ENST00000585031 CCDC192P0DO97 292 aa19.77■□□□□ 0.76
TOP3A-220ENST00000585031 RPL9P32969 192 aaKnown RBP19.77■□□□□ 0.76
TOP3A-220ENST00000585031 MCM4P33991 863 aa19.77■□□□□ 0.76
TOP3A-220ENST00000585031 ARHGAP29Q52LW3 1261 aa19.77■□□□□ 0.76
TOP3A-220ENST00000585031 ZBTB45Q96K62 511 aaPredicted RBP19.77■□□□□ 0.76
TOP3A-220ENST00000585031 TMEM209Q96SK2 561 aa19.77■□□□□ 0.76
TOP3A-220ENST00000585031 CCDC94Q9BW85 323 aaPredicted RBP19.77■□□□□ 0.76
TOP3A-220ENST00000585031 TARS2Q9BW92 718 aaKnown RBP19.77■□□□□ 0.76
TOP3A-220ENST00000585031 SCNM1Q9BWG6 230 aa19.77■□□□□ 0.76
TOP3A-220ENST00000585031 SMG9Q9H0W8 520 aaKnown RBP19.77■□□□□ 0.76
TOP3A-220ENST00000585031 TUBGCP4Q9UGJ1 667 aa19.77■□□□□ 0.76
TOP3A-220ENST00000585031 TPCN1Q9ULQ1 816 aa19.77■□□□□ 0.76
TOP3A-220ENST00000585031 PCDHB8Q9UN66 801 aa19.77■□□□□ 0.76
TOP3A-220ENST00000585031 THADAQ6YHU6 1953 aa19.77■□□□□ 0.75
TOP3A-220ENST00000585031 PCNX2A6NKB5 2137 aa19.76■□□□□ 0.75
TOP3A-220ENST00000585031 ARHGEF35A5YM69 484 aa19.76■□□□□ 0.75
TOP3A-220ENST00000585031 K7ERI5 159 aa19.76■□□□□ 0.75
TOP3A-220ENST00000585031 CEACAM1P13688 526 aa19.76■□□□□ 0.75
TOP3A-220ENST00000585031 XBP1P17861 261 aa19.76■□□□□ 0.75
TOP3A-220ENST00000585031 PROZP22891 400 aa19.76■□□□□ 0.75
TOP3A-220ENST00000585031 CDR1P51861 262 aa19.76■□□□□ 0.75
TOP3A-220ENST00000585031 EFNA5P52803 228 aa19.76■□□□□ 0.75
TOP3A-220ENST00000585031 YARSP54577 528 aaKnown RBP19.76■□□□□ 0.75
TOP3A-220ENST00000585031 ZNF568Q3ZCX4 644 aa19.76■□□□□ 0.75
TOP3A-220ENST00000585031 SEZ6Q53EL9 994 aa19.76■□□□□ 0.75
TOP3A-220ENST00000585031 TMEM196Q5HYL7 178 aa19.76■□□□□ 0.75
TOP3A-220ENST00000585031 SH3PXD2AQ5TCZ1 1133 aa19.76■□□□□ 0.75
TOP3A-220ENST00000585031 NAIF1Q69YI7 327 aaPredicted RBP19.76■□□□□ 0.75
TOP3A-220ENST00000585031 FAM200AQ8TCP9 573 aa19.76■□□□□ 0.75
TOP3A-220ENST00000585031 EDEM2Q9BV94 578 aa19.76■□□□□ 0.75
TOP3A-220ENST00000585031 TOPORSQ9NS56 1045 aaPredicted RBP19.76■□□□□ 0.75
TOP3A-220ENST00000585031 ORC3Q9UBD5 711 aaPredicted RBP19.76■□□□□ 0.75
TOP3A-220ENST00000585031 GCN1Q92616 2671 aaKnown RBP19.76■□□□□ 0.75
TOP3A-220ENST00000585031 FLNBO75369 2602 aaKnown RBP19.75■□□□□ 0.75
TOP3A-220ENST00000585031 CACNA1EQ15878 2313 aa19.75■□□□□ 0.75
TOP3A-220ENST00000585031 M0QZQ0 153 aa19.75■□□□□ 0.75
TOP3A-220ENST00000585031 PFKFB2O60825 505 aa19.75■□□□□ 0.75
TOP3A-220ENST00000585031 OAZ2O95190 189 aa19.75■□□□□ 0.75
TOP3A-220ENST00000585031 CSRP1P21291 193 aaKnown RBP19.75■□□□□ 0.75
TOP3A-220ENST00000585031 PPP2R5AQ15172 486 aa19.75■□□□□ 0.75
TOP3A-220ENST00000585031 SLC10A6Q3KNW5 377 aa19.75■□□□□ 0.75
TOP3A-220ENST00000585031 GPR158Q5T848 1215 aa19.75■□□□□ 0.75
TOP3A-220ENST00000585031 DAB2IPQ5VWQ8 1189 aa19.75■□□□□ 0.75
TOP3A-220ENST00000585031 CENPPQ6IPU0 288 aa19.75■□□□□ 0.75
TOP3A-220ENST00000585031 DNAJB7Q7Z6W7 309 aaPredicted RBP19.75■□□□□ 0.75
TOP3A-220ENST00000585031 ATAD1Q8NBU5 361 aa19.75■□□□□ 0.75
TOP3A-220ENST00000585031 APPL2Q8NEU8 664 aa19.75■□□□□ 0.75
TOP3A-220ENST00000585031 ACAP3Q96P50 834 aa19.75■□□□□ 0.75
TOP3A-220ENST00000585031 HHIPQ96QV1 700 aa19.75■□□□□ 0.75
TOP3A-220ENST00000585031 ATXN3LQ9H3M9 355 aa19.75■□□□□ 0.75
TOP3A-220ENST00000585031 HPS4Q9NQG7 708 aa19.75■□□□□ 0.75
TOP3A-220ENST00000585031 PDRG1Q9NUG6 133 aa19.75■□□□□ 0.75
TOP3A-220ENST00000585031 DAXXQ9UER7 740 aaPredicted RBP19.75■□□□□ 0.75
TOP3A-220ENST00000585031 OBSL1O75147 1896 aa19.74■□□□□ 0.75
TOP3A-220ENST00000585031 CDKL5O76039 1030 aa19.74■□□□□ 0.75
TOP3A-220ENST00000585031 EGFP01133 1207 aa19.74■□□□□ 0.75
TOP3A-220ENST00000585031 RPA1P27694 616 aa19.74■□□□□ 0.75
TOP3A-220ENST00000585031 EPHB3P54753 998 aa19.74■□□□□ 0.75
TOP3A-220ENST00000585031 CYP4F8P98187 520 aa19.74■□□□□ 0.75
TOP3A-220ENST00000585031 ITPRIPL2Q3MIP1 535 aa19.74■□□□□ 0.75
TOP3A-220ENST00000585031 DAW1Q8N136 415 aa19.74■□□□□ 0.75
TOP3A-220ENST00000585031 CAMKK1Q8N5S9 505 aa19.74■□□□□ 0.75
TOP3A-220ENST00000585031 BPIFB1Q8TDL5 484 aa19.74■□□□□ 0.75
TOP3A-220ENST00000585031 ZCCHC14Q8WYQ9 949 aaKnown RBP19.74■□□□□ 0.75
TOP3A-220ENST00000585031 IFT74Q96LB3 600 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms