RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 DCLK1O15075 740 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 GABRR2P28476 465 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 AVPR1AP37288 418 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 NAMPTP43490 491 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 TNK2Q07912 1038 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 PSMD2Q13200 908 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 WDR44Q5JSH3 913 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 ATF7IP2Q5U623 682 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 FSTL4Q6MZW2 842 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 RNF19BQ6ZMZ0 732 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 Q6ZUG5 572 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 MAEAQ7L5Y9 396 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 RPLP0P6Q8NHW5 317 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 DDX12PQ92771 950 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 RSPRY1Q96DX4 576 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 SUSD3Q96L08 255 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 IFT74Q96LB3 600 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 P2RY13Q9BPV8 354 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 GOLGA2P5Q9HBQ8 144 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 PCDHB9Q9Y5E1 797 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 VWA8A3KMH1 1905 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 SPAARA0A1B0GVQ0 90 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 OR6C75A6NL08 312 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 MEFVO15553 781 aaPredicted RBP12.16□□□□□ -0.46
CASC3-208ENST00000583649 OPHN1O60890 802 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 HOXD12P35452 270 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 SCAPQ12770 1279 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 DUSP4Q13115 394 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 NR1H3Q13133 447 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 PDGFRLQ15198 375 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 SPDYCQ5MJ68 293 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 ARMCX5Q6P1M9 558 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 PKN3Q6P5Z2 889 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 BLOC1S2Q6QNY1 142 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 DNAJB7Q7Z6W7 309 aaPredicted RBP12.16□□□□□ -0.46
CASC3-208ENST00000583649 SYT12Q8IV01 421 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 GPIHBP1Q8IV16 184 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 CPA6Q8N4T0 437 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 C3orf58Q8NDZ4 430 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 CEP76Q8TAP6 659 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 PSMG2Q969U7 264 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 KIF9Q9HAQ2 790 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 SCUBE2Q9NQ36 999 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 HSFX1Q9UBD0 423 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 PCDHB8Q9UN66 801 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 SDK1Q7Z5N4 2213 aa12.16□□□□□ -0.46
CASC3-208ENST00000583649 NCANO14594 1321 aa12.15□□□□□ -0.46
CASC3-208ENST00000583649 TNFRSF10BO14763 440 aa12.15□□□□□ -0.46
CASC3-208ENST00000583649 ZIC2O95409 532 aaPredicted RBP12.15□□□□□ -0.46
CASC3-208ENST00000583649 EGFP01133 1207 aa12.15□□□□□ -0.46
CASC3-208ENST00000583649 ENGP17813 658 aa12.15□□□□□ -0.46
CASC3-208ENST00000583649 DDX6P26196 483 aaKnown RBP eCLIP12.15□□□□□ -0.46
CASC3-208ENST00000583649 GRM5P41594 1212 aa12.15□□□□□ -0.46
CASC3-208ENST00000583649 TUFMP49411 452 aaKnown RBP12.15□□□□□ -0.46
CASC3-208ENST00000583649 CACNB1Q02641 598 aaPredicted RBP12.15□□□□□ -0.46
CASC3-208ENST00000583649 GFPT1Q06210 699 aaPredicted RBP12.15□□□□□ -0.46
CASC3-208ENST00000583649 SEMA3BQ13214 749 aa12.15□□□□□ -0.46
CASC3-208ENST00000583649 NTRK3Q16288 839 aa12.15□□□□□ -0.46
CASC3-208ENST00000583649 CD300LGQ6UXG3 332 aa12.15□□□□□ -0.46
CASC3-208ENST00000583649 TMC8Q8IU68 726 aa12.15□□□□□ -0.46
CASC3-208ENST00000583649 CHCHD4Q8N4Q1 142 aa12.15□□□□□ -0.46
CASC3-208ENST00000583649 LRIG1Q96JA1 1093 aa12.15□□□□□ -0.46
CASC3-208ENST00000583649 TBC1D32Q96NH3 1257 aa12.15□□□□□ -0.46
CASC3-208ENST00000583649 ACAP3Q96P50 834 aa12.15□□□□□ -0.46
CASC3-208ENST00000583649 PGLYRP2Q96PD5 576 aa12.15□□□□□ -0.46
CASC3-208ENST00000583649 HSD17B14Q9BPX1 270 aa12.15□□□□□ -0.46
CASC3-208ENST00000583649 EBF3Q9H4W6 596 aa12.15□□□□□ -0.46
CASC3-208ENST00000583649 CIZ1Q9ULV3 898 aaPredicted RBP12.15□□□□□ -0.46
CASC3-208ENST00000583649 ADAMTS20P59510 1910 aa12.14□□□□□ -0.47
CASC3-208ENST00000583649 PATE3B3GLJ2 98 aa12.14□□□□□ -0.47
CASC3-208ENST00000583649 K7ERI5 159 aa12.14□□□□□ -0.47
CASC3-208ENST00000583649 M0R2N6 131 aa12.14□□□□□ -0.47
CASC3-208ENST00000583649 OAZ2O95190 189 aa12.14□□□□□ -0.47
CASC3-208ENST00000583649 HOXC13P31276 330 aa12.14□□□□□ -0.47
CASC3-208ENST00000583649 GALK1P51570 392 aa12.14□□□□□ -0.47
CASC3-208ENST00000583649 GPR17Q13304 367 aa12.14□□□□□ -0.47
CASC3-208ENST00000583649 STXBP5Q5T5C0 1151 aa12.14□□□□□ -0.47
CASC3-208ENST00000583649 RAB44Q7Z6P3 723 aaPredicted RBP12.14□□□□□ -0.47
CASC3-208ENST00000583649 FBXL16Q8N461 479 aa12.14□□□□□ -0.47
CASC3-208ENST00000583649 BEST2Q8NFU1 509 aa12.14□□□□□ -0.47
CASC3-208ENST00000583649 PIGOQ8TEQ8 1089 aa12.14□□□□□ -0.47
CASC3-208ENST00000583649 HNRNPLLQ8WVV9 542 aaKnown RBP12.14□□□□□ -0.47
CASC3-208ENST00000583649 HAS1Q92839 578 aa12.14□□□□□ -0.47
CASC3-208ENST00000583649 CD101Q93033 1021 aa12.14□□□□□ -0.47
CASC3-208ENST00000583649 CNOT6LQ96LI5 555 aaKnown RBP12.14□□□□□ -0.47
CASC3-208ENST00000583649 FAM83CQ9BQN1 747 aa12.14□□□□□ -0.47
CASC3-208ENST00000583649 TCHPQ9BT92 498 aa12.14□□□□□ -0.47
CASC3-208ENST00000583649 LRRC3Q9BY71 257 aa12.14□□□□□ -0.47
CASC3-208ENST00000583649 TTC12Q9H892 705 aaPredicted RBP12.14□□□□□ -0.47
CASC3-208ENST00000583649 GPRC5CQ9NQ84 441 aa12.14□□□□□ -0.47
CASC3-208ENST00000583649 APOBEC2Q9Y235 224 aaKnown RBP12.14□□□□□ -0.47
CASC3-208ENST00000583649 TK2O00142 265 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 CFIP05156 583 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 SYPP08247 313 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 KCNE1P15382 129 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 PSMA5P28066 241 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 CCT2P78371 535 aaKnown RBP12.13□□□□□ -0.47
CASC3-208ENST00000583649 MYBPC2Q14324 1141 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 CALCRLQ16602 461 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 DUOXA1Q1HG43 343 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms