RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 DNAJB4Q9UDY4 337 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 POLIQ9UNA4 740 aa17.54■□□□□ 0.4
CDK5RAP3-228ENST00000583363 KPNA7A9QM74 516 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 GALTP07902 379 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 MYOGP15173 224 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 ATP2A2P16615 1042 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 TBXAS1P24557 533 aaPredicted RBP17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 OR1G1P47890 313 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 MFAP3P55082 362 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 ZBED6P86452 979 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 CCDC173Q0VFZ6 552 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 CUL2Q13617 745 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 SV2CQ496J9 727 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 ENOSF1Q7L5Y1 443 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 CACNA2D4Q7Z3S7 1137 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 C3orf58Q8NDZ4 430 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 ADAMTS19Q8TE59 1207 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 JAKMIP2Q96AA8 810 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 RAD9AQ99638 391 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 NIF3L1Q9GZT8 377 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 HCSTQ9UBK5 93 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 FAN1Q9Y2M0 1017 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 LUC7L2Q9Y383 392 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 INSL6Q9Y581 213 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 NCOR1O75376 2440 aa17.53■□□□□ 0.4
CDK5RAP3-228ENST00000583363 AKR1B15C9JRZ8 316 aaPredicted RBP17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 TMEM189-UBE2V1I3L0A0 370 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 NRP1O14786 923 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 B3GAT3O94766 335 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 TPM1P09493 284 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 P4HA1P13674 534 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 KRT9P35527 623 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 ASPAP45381 313 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 SLC11A1P49279 550 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 AARSP49588 968 aaKnown RBP eCLIP17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 JAM2P57087 298 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 MRPS5P82675 430 aaKnown RBP17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 BTG3Q14201 252 aaPredicted RBP17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 DRAP1Q14919 205 aaPredicted RBP17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 ARHGAP44Q17R89 818 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 LIMS2Q7Z4I7 341 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 ZNF397Q8NF99 534 aaPredicted RBP17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 YME1L1Q96TA2 773 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 ZBED2Q9BTP6 218 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 COLEC11Q9BWP8 271 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 BCO2Q9BYV7 579 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 GPR88Q9GZN0 384 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 CYP3A43Q9HB55 503 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 MYO6Q9UM54 1294 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 SNX9Q9Y5X1 595 aa17.52■□□□□ 0.4
CDK5RAP3-228ENST00000583363 COL4A6Q14031 1691 aa17.52■□□□□ 0.39
CDK5RAP3-228ENST00000583363 TCF20Q9UGU0 1960 aaKnown RBP17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 PTPRSQ13332 1948 aa17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 XIRP2A4UGR9 3374 aa17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 FOXN3O00409 490 aaPredicted RBP17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 CLSTN1O94985 981 aa17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 FAM163BP0C2L3 166 aa17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 ACO1P21399 889 aaKnown RBP17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 ADKP55263 362 aaKnown RBP17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 BCAR1P56945 870 aa17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 TNNC1P63316 161 aa17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 GOLGA8FQ08AF8 430 aa17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 GOLGA8DPQ0D2H9 430 aa17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 RAPGEF1Q13905 1077 aa17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 ARID5BQ14865 1188 aa17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 TIGD5Q53EQ6 642 aa17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 SMYD5Q6GMV2 418 aa17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 PDXDC1Q6P996 788 aa17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 CCDC186Q7Z3E2 898 aa17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 UBR7Q8N806 425 aa17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 TC2NQ8N9U0 490 aa17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 ARID3AQ99856 593 aa17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 RAPGEFL1Q9UHV5 662 aa17.51■□□□□ 0.39
CDK5RAP3-228ENST00000583363 GOLGA6L6A8MZA4 724 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 CYB561D2O14569 222 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 MFAP3LO75121 409 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 KIF4AO95239 1232 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 ITGB1P05556 798 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 WEE2P0C1S8 567 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 CDH8P55286 799 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 SOWAHAQ2M3V2 549 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 PPP2R2DQ66LE6 453 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 DPH6Q7L8W6 267 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 CNGA4Q8IV77 575 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 TOP6BLQ8N6T0 577 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 OR8K1Q8NGG5 319 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 SHC3Q92529 594 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 SENP8Q96LD8 212 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 SPAG5Q96R06 1193 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 MMS19Q96T76 1030 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 UHRF1Q96T88 793 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 SDCBP2Q9H190 292 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 NUCKS1Q9H1E3 243 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 FAM124BQ9H5Z6 455 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 CNTN6Q9UQ52 1028 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 PRG3Q9Y2Y8 225 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 PCDHA11Q9Y5I1 949 aa17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 MRPL42Q9Y6G3 142 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-228ENST00000583363 TRANK1O15050 2925 aa17.49■□□□□ 0.39
CDK5RAP3-228ENST00000583363 F8W810 466 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms