RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 EDNRBP24530 442 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 SLC16A1P53985 500 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 TLE1Q04724 770 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 PTPRRQ15256 657 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 ABCB5Q2M3G0 1257 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 TAPT1Q6NXT6 567 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 GADL1Q6ZQY3 521 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 MICALCLQ6ZW33 695 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 TMPRSS9Q7Z410 1059 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 DDX42Q86XP3 938 aaKnown RBP eCLIP5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 B3GALNT2Q8NCR0 500 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 PGBD1Q96JS3 809 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 CLPTM1LQ96KA5 538 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 VKORC1Q9BQB6 163 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 WDR26Q9H7D7 661 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 KMT5AQ9NQR1 393 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 ADAM21Q9UKJ8 722 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 PCDHGA9Q9Y5G4 932 aaKnown RBP5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 PCDHGA8Q9Y5G5 932 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 PCDHGA7Q9Y5G6 932 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 PCDHGA6Q9Y5G7 932 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 PCDHGA3Q9Y5H0 932 aa5.42□□□□□ -1.54
SMCHD1-208ENST00000583344 SCRIBQ14160 1630 aa5.41□□□□□ -1.54
SMCHD1-208ENST00000583344 XPOTO43592 962 aaKnown RBP5.41□□□□□ -1.54
SMCHD1-208ENST00000583344 CLSTN1O94985 981 aa5.41□□□□□ -1.54
SMCHD1-208ENST00000583344 RHOP08100 348 aa5.41□□□□□ -1.54
SMCHD1-208ENST00000583344 ITPKBP27987 946 aa5.41□□□□□ -1.54
SMCHD1-208ENST00000583344 RAB39AQ14964 217 aa5.41□□□□□ -1.54
SMCHD1-208ENST00000583344 ZNF778Q96MU6 729 aa5.41□□□□□ -1.54
SMCHD1-208ENST00000583344 DMRTA2Q96SC8 542 aa5.41□□□□□ -1.54
SMCHD1-208ENST00000583344 PUS7LQ9H0K6 701 aaKnown RBP5.41□□□□□ -1.54
SMCHD1-208ENST00000583344 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.41□□□□□ -1.54
SMCHD1-208ENST00000583344 MCM8Q9UJA3 840 aa5.41□□□□□ -1.54
SMCHD1-208ENST00000583344 PCDHB1Q9Y5F3 818 aa5.41□□□□□ -1.54
SMCHD1-208ENST00000583344 WDR27A2RRH5 827 aa5.4□□□□□ -1.54
SMCHD1-208ENST00000583344 KIF23Q02241 960 aaPredicted RBP5.4□□□□□ -1.54
SMCHD1-208ENST00000583344 PIGFQ07326 219 aa5.4□□□□□ -1.54
SMCHD1-208ENST00000583344 RASAL3Q86YV0 1011 aa5.4□□□□□ -1.54
SMCHD1-208ENST00000583344 HASPINQ8TF76 798 aa5.4□□□□□ -1.54
SMCHD1-208ENST00000583344 SMG7Q92540 1137 aaKnown RBP5.4□□□□□ -1.54
SMCHD1-208ENST00000583344 FAXDC2Q96IV6 333 aa5.4□□□□□ -1.54
SMCHD1-208ENST00000583344 TRIB1Q96RU8 372 aa5.4□□□□□ -1.54
SMCHD1-208ENST00000583344 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.4□□□□□ -1.54
SMCHD1-208ENST00000583344 PRKAB1Q9Y478 270 aa5.4□□□□□ -1.54
SMCHD1-208ENST00000583344 WNT6Q9Y6F9 365 aa5.4□□□□□ -1.54
SMCHD1-208ENST00000583344 ADGRA2Q96PE1 1338 aa5.4□□□□□ -1.55
SMCHD1-208ENST00000583344 CECR2Q9BXF3 1484 aa5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 MROH2BQ7Z745 1585 aa5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 WDR91A4D1P6 747 aa5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 MYBL2P10244 700 aa5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 NPTX2P47972 431 aa5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 ZNF81P51508 661 aa5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 POU6F2P78424 691 aaPredicted RBP5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 HLXQ14774 488 aaPredicted RBP5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 FCRLBQ6BAA4 426 aa5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 SLC30A10Q6XR72 485 aa5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 PTF1AQ7RTS3 328 aa5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 C1QL2Q7Z5L3 287 aa5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 SCARB1Q8WTV0 552 aa5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 TEKT5Q96M29 485 aa5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 HAPLN3Q96S86 360 aa5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 VRK1Q99986 396 aaPredicted RBP5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 MRPS18AQ9NVS2 196 aaKnown RBP5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 SERPINB13Q9UIV8 391 aa5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 NR2E3Q9Y5X4 410 aa5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 WRNQ14191 1432 aaPredicted RBP eCLIP5.39□□□□□ -1.55
SMCHD1-208ENST00000583344 KLHL33A6NCF5 533 aa5.38□□□□□ -1.55
SMCHD1-208ENST00000583344 PSMC1P62191 440 aaKnown RBP5.38□□□□□ -1.55
SMCHD1-208ENST00000583344 ITIH3Q06033 890 aa5.38□□□□□ -1.55
SMCHD1-208ENST00000583344 NECAB2Q7Z6G3 386 aa5.38□□□□□ -1.55
SMCHD1-208ENST00000583344 FAM9AQ8IZU1 332 aaPredicted RBP5.38□□□□□ -1.55
SMCHD1-208ENST00000583344 CAMKK1Q8N5S9 505 aa5.38□□□□□ -1.55
SMCHD1-208ENST00000583344 AOPEPQ8N6M6 819 aa5.38□□□□□ -1.55
SMCHD1-208ENST00000583344 COA7Q96BR5 231 aa5.38□□□□□ -1.55
SMCHD1-208ENST00000583344 SMOQ99835 787 aa5.38□□□□□ -1.55
SMCHD1-208ENST00000583344 SMOC2Q9H3U7 446 aa5.38□□□□□ -1.55
SMCHD1-208ENST00000583344 KLC4Q9NSK0 619 aa5.38□□□□□ -1.55
SMCHD1-208ENST00000583344 CALCOCO1Q9P1Z2 691 aa5.38□□□□□ -1.55
SMCHD1-208ENST00000583344 TRHDEQ9UKU6 1024 aa5.38□□□□□ -1.55
SMCHD1-208ENST00000583344 AOX1Q06278 1338 aa5.38□□□□□ -1.55
SMCHD1-208ENST00000583344 A0A0B4J269 797 aa5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 ZNF785A8K8V0 405 aa5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 E7ENX8 843 aa5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 FZD9O00144 591 aa5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 F2RL2O00254 374 aa5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 POLRMTO00411 1230 aaKnown RBP5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 URI1O94763 535 aaPredicted RBP5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 PRKCGP05129 697 aa5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 CELA2AP08217 269 aa5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 LPOP22079 712 aaPredicted RBP5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 NXPH1P58417 271 aa5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 TAP2Q03519 686 aa5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 TUBB3Q13509 450 aa5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 PCBP2Q15366 365 aaKnown RBP eCLIP5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 KHDC1Q4VXA5 237 aaKnown RBP5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 CCDC93Q567U6 631 aa5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 POC1BQ8TC44 478 aa5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 NSUN6Q8TEA1 469 aaKnown RBP5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 C1QTNF7Q9BXJ2 289 aa5.37□□□□□ -1.55
SMCHD1-208ENST00000583344 CCDC8Q9H0W5 538 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms