RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 LOC730098B7Z3J9 87 aa13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 PRRG1O14668 218 aa13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 CCL16O15467 120 aa13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 PRPF40AO75400 957 aaKnown RBP13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 OAZ2O95190 189 aa13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 UBE2HP62256 183 aa13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 CYP26C1Q6V0L0 522 aa13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 SLC9A9Q8IVB4 645 aa13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 LRRC52Q8N7C0 313 aa13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 ZNF461Q8TAF7 563 aa13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 ZNF707Q96C28 371 aaPredicted RBP13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 OXCT2Q9BYC2 517 aaPredicted RBP13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 PRKD2Q9BZL6 878 aa13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 CYP4F11Q9HBI6 524 aa13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 DMAC2Q9NW81 257 aa13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 SIX4Q9UIU6 781 aa13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 DSEQ9UL01 958 aa13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 POLIQ9UNA4 740 aa13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 TRAF3IP3Q9Y228 551 aa13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 PCDHA5Q9Y5H7 936 aa13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 NCOR1O75376 2440 aa13.58□□□□□ -0.24
SMARCE1-218ENST00000582955 OR6C75A6NL08 312 aa13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 ABLIM3O94929 683 aa13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 CYP11A1P05108 521 aa13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 HNRNPA1P09651 372 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 OR4Q2P0C623 313 aa13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 NR2F2P24468 414 aa13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 CASP4P49662 377 aa13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 MYO1EQ12965 1108 aa13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 UVSSAQ2YD98 709 aa13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 ZNF658Q5TYW1 1059 aaPredicted RBP13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 WSCD1Q658N2 575 aa13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 TPGS2Q68CL5 300 aa13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 SCARA3Q6AZY7 606 aa13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 TRAPPC11Q7Z392 1133 aa13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 THEM5Q8N1Q8 247 aa13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 TDRD5Q8NAT2 981 aaKnown RBP13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 MFSD14AQ96MC6 490 aa13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 FRMD4BQ9Y2L6 1034 aa13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 C2orf16Q68DN1 1984 aa13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 CLUHO75153 1309 aa13.57□□□□□ -0.24
SMARCE1-218ENST00000582955 TSC2P49815 1807 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 C2CD4DB7Z1M9 353 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 HUS1O60921 280 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 PHACTR2O75167 634 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 XYLBO75191 536 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 CLSTN1O94985 981 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 LRG1P02750 347 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 ATF2P15336 505 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 RPL13P26373 211 aaKnown RBP13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 HOXA9P31269 272 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 PRCPP42785 496 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 ADCY1Q08828 1119 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 MYBPC2Q14324 1141 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 ISM2Q6H9L7 571 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 RNF19BQ6ZMZ0 732 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 GRASPQ7Z6J2 395 aaPredicted RBP13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 RNF135Q8IUD6 432 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 ELOA2Q8IYF1 753 aaPredicted RBP13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 CXorf38Q8TB03 319 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 SPATA20Q8TB22 786 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 TMEM174Q8WUU8 243 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 KHSRPQ92945 711 aaKnown RBP eCLIP13.56□□□□□ -0.247e-7■■■□□ 17.5
SMARCE1-218ENST00000582955 ACSF2Q96CM8 615 aaPredicted RBP13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 BORCS6Q96GS4 357 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 HPDLQ96IR7 371 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 PGLYRP2Q96PD5 576 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 TMEM209Q96SK2 561 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 RHOBTB2Q9BYZ6 727 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 WDR6Q9NNW5 1121 aaKnown RBP13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 AFF4Q9UHB7 1163 aaKnown RBP13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 SNX9Q9Y5X1 595 aa13.56□□□□□ -0.24
SMARCE1-218ENST00000582955 LRRIQ3A6PVS8 624 aaPredicted RBP13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 SEC24AO95486 1093 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 BIRC3Q13489 604 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 TRPC3Q13507 836 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 NFIL3Q16649 462 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 RTL10Q7L3V2 364 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 GET4Q7L5D6 327 aaPredicted RBP13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 OTOP3Q7RTS5 596 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 TCEAL8Q8IYN2 117 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 PDCL2Q8N4E4 241 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 OR10T2Q8NGX3 314 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 PLEKHO2Q8TD55 490 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 PARD3BQ8TEW8 1205 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 ZNF516Q92618 1163 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 IPO9Q96P70 1041 aaKnown RBP13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 TSG101Q99816 390 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 GTPBP4Q9BZE4 634 aaKnown RBP13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 GZF1Q9H116 711 aaPredicted RBP13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 MUTYHQ9UIF7 546 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 MAN1B1Q9UKM7 699 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 L1RE1Q9UN81 338 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 USTQ9Y2C2 406 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 INSL5Q9Y5Q6 135 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 DENND4AQ7Z401 1863 aa13.55□□□□□ -0.24
SMARCE1-218ENST00000582955 BDP1A6H8Y1 2624 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 DCXO43602 365 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 AKAP3O75969 853 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 PAPLNO95428 1278 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms