RNA–Protein interactions for RNA: ENST00000582844.5

CSNK1D-221, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 957 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-221ENST00000582844 PAX3P23760 479 aa23.03■■□□□ 1.28
CSNK1D-221ENST00000582844 WNT7BP56706 349 aa23.03■■□□□ 1.28
CSNK1D-221ENST00000582844 E2F4Q16254 413 aa23.03■■□□□ 1.28
CSNK1D-221ENST00000582844 TANGO2Q6ICL3 276 aa23.03■■□□□ 1.28
CSNK1D-221ENST00000582844 PHLDB3Q6NSJ2 640 aa23.03■■□□□ 1.28
CSNK1D-221ENST00000582844 DTWD2Q8NBA8 298 aa23.03■■□□□ 1.28
CSNK1D-221ENST00000582844 SLC27A5Q9Y2P5 690 aa23.03■■□□□ 1.28
CSNK1D-221ENST00000582844 YIPF1Q9Y548 306 aa23.03■■□□□ 1.28
CSNK1D-221ENST00000582844 COL4A3Q01955 1670 aa23.03■■□□□ 1.28
CSNK1D-221ENST00000582844 GOLGA8IPA6NC78 632 aa23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 GOLGA8JA6NMD2 632 aa23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 CUTAO60888 179 aa23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 ECI2O75521 394 aa23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 MICAL2O94851 1124 aa23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 PRPF6O94906 941 aaKnown RBP23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 IL18RAPO95256 599 aa23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 CYP11A1P05108 521 aa23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 ZSCAN22P10073 491 aaPredicted RBP23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 MYL4P12829 197 aa23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 SNW1Q13573 536 aaKnown RBP23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 MYBPC2Q14324 1141 aa23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 CENPPQ6IPU0 288 aa23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 SHC4Q6S5L8 630 aa23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 CCDC65Q8IXS2 484 aa23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 SPRYD3Q8NCJ5 442 aa23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 HPS3Q969F9 1004 aa23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 KBTBD4Q9NVX7 518 aa23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 MYO15AQ9UKN7 3530 aa23.02■■□□□ 1.28
CSNK1D-221ENST00000582844 CYB561D2O14569 222 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 MOSPD3O75425 235 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 GJA1P17302 382 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 GARTP22102 1010 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 TAF6P49848 677 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 CDR1P51861 262 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 ALCAMQ13740 583 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 SLC44A4Q53GD3 710 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 FAM78AQ5JUQ0 283 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 ARMCX5Q6P1M9 558 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 ATAD1Q8NBU5 361 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 GLIS3Q8NEA6 775 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 OR10T2Q8NGX3 314 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 DHX58Q96C10 678 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 BORCS6Q96GS4 357 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 ZSWIM3Q96MP5 696 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 PYM1Q9BRP8 204 aaKnown RBP23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 CBWD1Q9BRT8 395 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 TNMDQ9H2S6 317 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 PCIF1Q9H4Z3 704 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 SIT1Q9Y3P8 196 aa23.01■■□□□ 1.27
CSNK1D-221ENST00000582844 MTMR11A4FU01 709 aa23■■□□□ 1.27
CSNK1D-221ENST00000582844 LDHAP00338 332 aaKnown RBP23■■□□□ 1.27
CSNK1D-221ENST00000582844 F13A1P00488 732 aa23■■□□□ 1.27
CSNK1D-221ENST00000582844 DCNP07585 359 aaKnown RBP23■■□□□ 1.27
CSNK1D-221ENST00000582844 EPHA5P54756 1037 aa23■■□□□ 1.27
CSNK1D-221ENST00000582844 STARD6P59095 220 aa23■■□□□ 1.27
CSNK1D-221ENST00000582844 NT5DC4Q86YG4 428 aa23■■□□□ 1.27
CSNK1D-221ENST00000582844 BRSK2Q8IWQ3 736 aa23■■□□□ 1.27
CSNK1D-221ENST00000582844 TTC9BQ8N6N2 239 aa23■■□□□ 1.27
CSNK1D-221ENST00000582844 FOXQ1Q9C009 403 aa23■■□□□ 1.27
CSNK1D-221ENST00000582844 LRRC27Q9C0I9 530 aa23■■□□□ 1.27
CSNK1D-221ENST00000582844 DNAJC25Q9H1X3 360 aa23■■□□□ 1.27
CSNK1D-221ENST00000582844 TMEM206Q9H813 350 aa23■■□□□ 1.27
CSNK1D-221ENST00000582844 ASAH2Q9NR71 780 aa23■■□□□ 1.27
CSNK1D-221ENST00000582844 VPS13AQ96RL7 3174 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 KPNA7A9QM74 516 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 SOAT2O75908 522 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 PDIA4P13667 645 aaKnown RBP22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 FCARP24071 287 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 ALDH1A3P47895 512 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 EPHB3P54753 998 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 TFAMQ00059 246 aaKnown RBP22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 PKP1Q13835 747 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 ANGPT1Q15389 498 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 WSCD1Q658N2 575 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 SCARA3Q6AZY7 606 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 METTL23Q86XA0 190 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 IQUBQ8NA54 791 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 NOC3LQ8WTT2 800 aaKnown RBP22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 ELSPBP1Q96BH3 223 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 SHDQ96IW2 340 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 FAM84AQ96KN4 292 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 LRRC3Q9BY71 257 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 TRIM9Q9C026 710 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 CUEDC2Q9H467 287 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 RBAKQ9NYW8 714 aaPredicted RBP22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 DSEQ9UL01 958 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 MIA3Q5JRA6 1907 aa22.99■■□□□ 1.27
CSNK1D-221ENST00000582844 EXTL3O43909 919 aa22.98■■□□□ 1.27
CSNK1D-221ENST00000582844 PFKPQ01813 784 aa22.98■■□□□ 1.27
CSNK1D-221ENST00000582844 PLD1Q13393 1074 aa22.98■■□□□ 1.27
CSNK1D-221ENST00000582844 MLF2Q15773 248 aaPredicted RBP22.98■■□□□ 1.27
CSNK1D-221ENST00000582844 SLC39A12Q504Y0 691 aa22.98■■□□□ 1.27
CSNK1D-221ENST00000582844 LEMD2Q8NC56 503 aa22.98■■□□□ 1.27
CSNK1D-221ENST00000582844 ASB16Q96NS5 453 aa22.98■■□□□ 1.27
CSNK1D-221ENST00000582844 ZCWPW1Q9H0M4 648 aa22.98■■□□□ 1.27
CSNK1D-221ENST00000582844 ZFP14Q9HCL3 533 aa22.98■■□□□ 1.27
CSNK1D-221ENST00000582844 DLGAP2Q9P1A6 1054 aa22.98■■□□□ 1.27
CSNK1D-221ENST00000582844 DMDP11532 3685 aa22.97■■□□□ 1.27
CSNK1D-221ENST00000582844 LRRN2O75325 713 aa22.97■■□□□ 1.27
CSNK1D-221ENST00000582844 ITGB3P05106 788 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms