RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 UBR7Q8N806 425 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 APPL2Q8NEU8 664 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ZNF397Q8NF99 534 aaPredicted RBP9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SPATA18Q8TC71 538 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 BAP1Q92560 729 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 KAT5Q92993 513 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 IGSF21Q96ID5 467 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PDLIM2Q96JY6 352 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SUSD3Q96L08 255 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 MMS19Q96T76 1030 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 NUCKS1Q9H1E3 243 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PRO3102Q9H379 93 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 NLRC4Q9NPP4 1024 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SPG21Q9NZD8 308 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 AJAP1Q9UKB5 411 aaPredicted RBP9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ADAM28Q9UKQ2 775 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PCDHB8Q9UN66 801 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CNTN6Q9UQ52 1028 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PRG3Q9Y2Y8 225 aaPredicted RBP9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 LUC7L2Q9Y383 392 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PCDHB12Q9Y5F1 795 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 FHOD1Q9Y613 1164 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 MKI67P46013 3256 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 AKR1B15C9JRZ8 316 aaPredicted RBP9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 F8W810 466 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CYP11A1P05108 521 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ITGB1P05556 798 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 WEE2P0C1S8 567 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TYMPP19971 482 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 WARSP23381 471 aaKnown RBP9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 KRT9P35527 623 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 BMPR1AP36894 532 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 GNL1P36915 607 aaPredicted RBP9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 FXR1P51114 621 aaKnown RBP eCLIP9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CDH8P55286 799 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PLCB3Q01970 1234 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 RAPGEF1Q13905 1077 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ARID5BQ14865 1188 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 FAM109BQ6ICB4 259 aaPredicted RBP9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PDXDC1Q6P996 788 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 UNC93AQ86WB7 457 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 METTL23Q86XA0 190 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TDHQ8IZJ6 230 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TMEM86AQ8N2M4 240 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PDCL2Q8N4E4 241 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SPC24Q8NBT2 197 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 OR8K1Q8NGG5 319 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SHC3Q92529 594 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SYN2Q92777 582 aaPredicted RBP9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SPAG5Q96R06 1193 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PPP1R9BQ96SB3 815 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 GPR88Q9GZN0 384 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SDCBP2Q9H190 292 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CISHQ9NSE2 258 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 AIPL1Q9NZN9 384 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 DSEQ9UL01 958 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 L1RE1Q9UN81 338 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 RWDD3Q9Y3V2 267 aa9.8□□□□□ -0.84
CDK5RAP3-220ENST00000581160 LCHNA4D1U4 455 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 LINC01553A4QN01 128 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 LRRC53A6NM62 1247 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 GOLGA6L6A8MZA4 724 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 I3L4J1 428 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 GABRDO14764 452 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SYN3O14994 580 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CILPO75339 1184 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 RB1P06400 928 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ODC1P11926 461 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 MYOGP15173 224 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 FGFR3P22607 806 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 HNRNPH3P31942 346 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SOX5P35711 763 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PPM1AP35813 382 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PBX3P40426 434 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 RAP1GAPP47736 663 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 LHX1P48742 406 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ADKP55263 362 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 BPIFB4P59827 614 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 KRT17Q04695 432 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 INCA1Q0VD86 236 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CCDC173Q0VFZ6 552 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 MRPL58Q14197 206 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 RAB30Q15771 203 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 FAM171A1Q5VUB5 890 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SFMBT2Q5VUG0 894 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 WSCD1Q658N2 575 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 FUT10Q6P4F1 479 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SCARA5Q6ZMJ2 495 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 IRF2BP2Q7Z5L9 587 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 DDX53Q86TM3 631 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CNGA4Q8IV77 575 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 FMNL3Q8IVF7 1028 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 FAM71AQ8IYT1 594 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 RNF168Q8IYW5 571 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TC2NQ8N9U0 490 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 WHAMMQ8TF30 809 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 HASPINQ8TF76 798 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 BCL7CQ8WUZ0 217 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 KBTBD7Q8WVZ9 684 aa9.79□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SAMD11Q96NU1 681 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms