RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 ZNF560Q96MR9 790 aa14.3□□□□□ -0.12
NUP85-215ENST00000580879 PGLYRP2Q96PD5 576 aa14.3□□□□□ -0.12
NUP85-215ENST00000580879 TMEM209Q96SK2 561 aa14.3□□□□□ -0.12
NUP85-215ENST00000580879 CGRRF1Q99675 332 aa14.3□□□□□ -0.12
NUP85-215ENST00000580879 EPHX3Q9H6B9 360 aa14.3□□□□□ -0.12
NUP85-215ENST00000580879 CYP4F11Q9HBI6 524 aa14.3□□□□□ -0.12
NUP85-215ENST00000580879 DMAC2Q9NW81 257 aa14.3□□□□□ -0.12
NUP85-215ENST00000580879 ZDHHC7Q9NXF8 308 aa14.3□□□□□ -0.12
NUP85-215ENST00000580879 POLIQ9UNA4 740 aa14.3□□□□□ -0.12
NUP85-215ENST00000580879 PRRG1O14668 218 aa14.29□□□□□ -0.12
NUP85-215ENST00000580879 CALUO43852 315 aaPredicted RBP14.29□□□□□ -0.12
NUP85-215ENST00000580879 PRPF40AO75400 957 aaKnown RBP14.29□□□□□ -0.12
NUP85-215ENST00000580879 ABLIM3O94929 683 aa14.29□□□□□ -0.12
NUP85-215ENST00000580879 KIF20AO95235 890 aa14.29□□□□□ -0.12
NUP85-215ENST00000580879 ELF1P32519 619 aa14.29□□□□□ -0.12
NUP85-215ENST00000580879 PNPLA4P41247 253 aa14.29□□□□□ -0.12
NUP85-215ENST00000580879 RNF19BQ6ZMZ0 732 aa14.29□□□□□ -0.12
NUP85-215ENST00000580879 CCDC149Q6ZUS6 474 aa14.29□□□□□ -0.12
NUP85-215ENST00000580879 TRAPPC11Q7Z392 1133 aa14.29□□□□□ -0.12
NUP85-215ENST00000580879 GRASPQ7Z6J2 395 aaPredicted RBP14.29□□□□□ -0.12
NUP85-215ENST00000580879 OR10T2Q8NGX3 314 aa14.29□□□□□ -0.12
NUP85-215ENST00000580879 ZNF516Q92618 1163 aa14.29□□□□□ -0.12
NUP85-215ENST00000580879 RMND1Q9NWS8 449 aa14.29□□□□□ -0.12
NUP85-215ENST00000580879 MUTYHQ9UIF7 546 aa14.29□□□□□ -0.12
NUP85-215ENST00000580879 HOOK1Q9UJC3 728 aaKnown RBP14.29□□□□□ -0.12
NUP85-215ENST00000580879 TRAF3IP3Q9Y228 551 aa14.29□□□□□ -0.12
NUP85-215ENST00000580879 C2orf16Q68DN1 1984 aa14.29□□□□□ -0.12
NUP85-215ENST00000580879 OR6C75A6NL08 312 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 LRRIQ3A6PVS8 624 aaPredicted RBP14.28□□□□□ -0.12
NUP85-215ENST00000580879 CLUHO75153 1309 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 CYP11A1P05108 521 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 ATF2P15336 505 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 PAX3P23760 479 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 NR2F2P24468 414 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 PRCPP42785 496 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 ADCY1Q08828 1119 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 ZNF658Q5TYW1 1059 aaPredicted RBP14.28□□□□□ -0.12
NUP85-215ENST00000580879 TPGS2Q68CL5 300 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 METTL23Q86XA0 190 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 SLC9A9Q8IVB4 645 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 LRRC52Q8N7C0 313 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 TDRD5Q8NAT2 981 aaKnown RBP14.28□□□□□ -0.12
NUP85-215ENST00000580879 SPATA20Q8TB22 786 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 EEF2KMTQ96G04 330 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 HPDLQ96IR7 371 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 GSDMAQ96QA5 445 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 RTP3Q9BQQ7 232 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 WDR6Q9NNW5 1121 aaKnown RBP14.28□□□□□ -0.12
NUP85-215ENST00000580879 HCFC1R1Q9NWW0 138 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 DSEQ9UL01 958 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 L1RE1Q9UN81 338 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 R3HCC1Q9Y3T6 440 aaKnown RBP14.28□□□□□ -0.12
NUP85-215ENST00000580879 NR2E1Q9Y466 385 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 MTCL1Q9Y4B5 1905 aaKnown RBP14.28□□□□□ -0.12
NUP85-215ENST00000580879 SNX9Q9Y5X1 595 aa14.28□□□□□ -0.12
NUP85-215ENST00000580879 ARHGEF37A1IGU5 675 aa14.27□□□□□ -0.13
NUP85-215ENST00000580879 N4BP1O75113 896 aaKnown RBP14.27□□□□□ -0.13
NUP85-215ENST00000580879 VNN2O95498 520 aa14.27□□□□□ -0.13
NUP85-215ENST00000580879 CST3P01034 146 aaPredicted RBP14.27□□□□□ -0.13
NUP85-215ENST00000580879 HNRNPA1P09651 372 aaKnown RBP eCLIP14.27□□□□□ -0.13
NUP85-215ENST00000580879 UBE2HP62256 183 aa14.27□□□□□ -0.13
NUP85-215ENST00000580879 DLG4P78352 724 aa14.27□□□□□ -0.13
NUP85-215ENST00000580879 UVSSAQ2YD98 709 aa14.27□□□□□ -0.13
NUP85-215ENST00000580879 CYP26C1Q6V0L0 522 aa14.27□□□□□ -0.13
NUP85-215ENST00000580879 GET4Q7L5D6 327 aaPredicted RBP14.27□□□□□ -0.13
NUP85-215ENST00000580879 TCEAL8Q8IYN2 117 aa14.27□□□□□ -0.13
NUP85-215ENST00000580879 PDCL2Q8N4E4 241 aa14.27□□□□□ -0.13
NUP85-215ENST00000580879 PARD3BQ8TEW8 1205 aa14.27□□□□□ -0.13
NUP85-215ENST00000580879 CRISPLD1Q9H336 500 aa14.27□□□□□ -0.13
NUP85-215ENST00000580879 AFF4Q9UHB7 1163 aaKnown RBP14.27□□□□□ -0.13
NUP85-215ENST00000580879 MAN1B1Q9UKM7 699 aa14.27□□□□□ -0.13
NUP85-215ENST00000580879 FRMD4BQ9Y2L6 1034 aa14.27□□□□□ -0.13
NUP85-215ENST00000580879 SLC27A5Q9Y2P5 690 aa14.27□□□□□ -0.13
NUP85-215ENST00000580879 INSL5Q9Y5Q6 135 aa14.27□□□□□ -0.13
NUP85-215ENST00000580879 TSC2P49815 1807 aa14.27□□□□□ -0.13
NUP85-215ENST00000580879 BIN1O00499 593 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 DCXO43602 365 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 HCRTO43612 131 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 HUS1O60921 280 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 XYLBO75191 536 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 AKAP3O75969 853 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 PAPLNO95428 1278 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 LRG1P02750 347 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 HOXA9P31269 272 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 GBP2P32456 591 aaPredicted RBP14.26□□□□□ -0.13
NUP85-215ENST00000580879 MYO1EQ12965 1108 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 DUSP4Q13115 394 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 GPR17Q13304 367 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 ADAM9Q13443 819 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 BIRC3Q13489 604 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 MYBPC2Q14324 1141 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 SLC39A12Q504Y0 691 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 ZCWPW2Q504Y3 356 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 OTOP3Q7RTS5 596 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 OSTM1Q86WC4 334 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 THEM5Q8N1Q8 247 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 TTC9BQ8N6N2 239 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 ATAD1Q8NBU5 361 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 TMEM174Q8WUU8 243 aa14.26□□□□□ -0.13
NUP85-215ENST00000580879 ELMO3Q96BJ8 720 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms