RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 SNX25Q9H3E2 840 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 PDE4DIPQ5VU43 2346 aa12.59□□□□□ -0.39
SNORD3C-201ENST00000580533 LCHNA4D1U4 455 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 GRXCR1A8MXD5 290 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 SOD2P04179 222 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 PCSK1P29120 753 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 YWHAHQ04917 246 aaPredicted RBP12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 PTPROQ16827 1216 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 TSR1Q2NL82 804 aaKnown RBP12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 FIGNQ5HY92 759 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 FAM171A1Q5VUB5 890 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 FAM109BQ6ICB4 259 aaPredicted RBP12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 ZNF280DQ6N043 979 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 PPFIBP1Q86W92 1011 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 ADGRF2Q8IZF7 708 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 SEMA4DQ92854 862 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 PPP2R3CQ969Q6 453 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 TNIP3Q96KP6 325 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 NAP1L5Q96NT1 182 aaPredicted RBP12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 SPAG5Q96R06 1193 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 PAAF1Q9BRP4 392 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 HERC2P3Q9BVR0 1158 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 NKX2-4Q9H2Z4 354 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 NGRNQ9NPE2 291 aaKnown RBP12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 FAM207AQ9NSI2 230 aaPredicted RBP12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 MARCH5Q9NX47 278 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 CEP72Q9P209 647 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 PTPRSQ13332 1948 aa12.58□□□□□ -0.4
SNORD3C-201ENST00000580533 CEP290O15078 2479 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 NT5C1B-RDH14C9J2C7 533 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 PPEF2O14830 753 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 ZNF500O60304 480 aaPredicted RBP12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 CYP11A1P05108 521 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 UCHL3P15374 230 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 SLC9A1P19634 815 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 GLUD2P49448 558 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 ZNF75DP51815 510 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 TSPY1Q01534 308 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 TAP1Q03518 808 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 LRMPQ12912 555 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 MAPRE1Q15691 268 aaKnown RBP12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 TIGD5Q53EQ6 642 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 KLHDC7AQ5VTJ3 777 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 OVOS1Q6IE37 1185 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 UNC93AQ86WB7 457 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 DRC7Q8IY82 874 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 KLHL23Q8NBE8 558 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 LMO3Q8TAP4 145 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 HASPINQ8TF76 798 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 PI4K2AQ9BTU6 479 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 BCO2Q9BYV7 579 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 UBE2TQ9NPD8 197 aaPredicted RBP12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 MRPL17Q9NRX2 175 aaKnown RBP12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 MYO6Q9UM54 1294 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 COLQQ9Y215 455 aaPredicted RBP12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 SIK3Q9Y2K2 1263 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 YBX2Q9Y2T7 364 aaKnown RBP12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 TRIP11Q15643 1979 aa12.57□□□□□ -0.4
SNORD3C-201ENST00000580533 A0A1W2PQJ5 194 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 OR6C75A6NL08 312 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 H3BNC9 293 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 TEX33O43247 280 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 B4GALT3O60512 393 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 MYOGP15173 224 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 FGFR3P22607 806 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 WARSP23381 471 aaKnown RBP12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 CDC25BP30305 580 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 GNL1P36915 607 aaPredicted RBP12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 PBX3P40426 434 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 ASPAP45381 313 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 BRCC3P46736 316 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 BPIFB4P59827 614 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 SMARCB1Q12824 385 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 GPM6BQ13491 265 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 RAPGEF1Q13905 1077 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 SMC1AQ14683 1233 aaKnown RBP12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 ELMSAN1Q6PJG2 1045 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 SCARA5Q6ZMJ2 495 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 CEP57Q86XR8 500 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 VSTM4Q8IW00 320 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 DCP1BQ8IZD4 617 aaKnown RBP12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 PDCL2Q8N4E4 241 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 C3orf58Q8NDZ4 430 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 OR6B3Q8NGW1 331 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 RABGGTAQ92696 567 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 C17orf80Q9BSJ5 609 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 EMILIN2Q9BXX0 1053 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 STK33Q9BYT3 514 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 ENTPD7Q9NQZ7 604 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 TLR9Q9NR96 1032 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 HCSTQ9UBK5 93 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 DNAJC12Q9UKB3 198 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 MTUS1Q9ULD2 1270 aa12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 BARX2Q9UMQ3 279 aaPredicted RBP12.56□□□□□ -0.4
SNORD3C-201ENST00000580533 A8MXQ7 604 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 SPTLC1O15269 473 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 OAZ2O95190 189 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 ADCY5O95622 1261 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms