RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 NFX1Q12986 1120 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 RPS6KA1Q15418 735 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 LLGL2Q6P1M3 1020 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 TRIM72Q6ZMU5 477 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 MON1BQ7L1V2 547 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 MCOLN2Q8IZK6 566 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ZNF564Q8TBZ8 553 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 TFAP2BQ92481 460 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 MS4A14Q96JA4 679 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ABCB6Q9NP58 842 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 MTA2O94776 668 aa15.81■□□□□ 0.12
CDK5RAP3-218ENST00000580391 STAU1O95793 577 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-218ENST00000580391 GRK4P32298 578 aa15.81■□□□□ 0.12
CDK5RAP3-218ENST00000580391 C2orf54Q08AI8 447 aa15.81■□□□□ 0.12
CDK5RAP3-218ENST00000580391 LHX8Q68G74 356 aa15.81■□□□□ 0.12
CDK5RAP3-218ENST00000580391 BEST2Q8NFU1 509 aa15.81■□□□□ 0.12
CDK5RAP3-218ENST00000580391 WHAMMQ8TF30 809 aa15.81■□□□□ 0.12
CDK5RAP3-218ENST00000580391 FAXDC2Q96IV6 333 aa15.81■□□□□ 0.12
CDK5RAP3-218ENST00000580391 C11orf70Q9BRQ4 267 aa15.81■□□□□ 0.12
CDK5RAP3-218ENST00000580391 AGO3Q9H9G7 860 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-218ENST00000580391 HMX1Q9NP08 348 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-218ENST00000580391 TDRD15B5MCY1 1934 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-218ENST00000580391 SMIM28A0A1B0GU29 152 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 TMEM110-MUSTN1A8MSY1 372 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 KCNK3O14649 394 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 RAD23BP54727 409 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 TNNC1P63316 161 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 PHLDB2Q86SQ0 1253 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 RABGGTAQ92696 567 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 BTBD6Q96KE9 485 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ELOVL4Q9GZR5 314 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 SAGE1Q9NXZ1 904 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 AMFRQ9UKV5 643 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 UBQLN1Q9UMX0 589 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 MEIS3P2A8K0S8 358 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 CILPO75339 1184 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 CABYRO75952 493 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 GHRP10912 638 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 P4HA1P13674 534 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 CD19P15391 556 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 RRM1P23921 792 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 SOX4Q06945 474 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 TRIM71Q2Q1W2 868 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 XKR4Q5GH76 650 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 CCDC181Q5TID7 509 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 C11orf63Q6NUN7 778 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 CPNE8Q86YQ8 564 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 SLC4A11Q8NBS3 891 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 C1orf131Q8NDD1 294 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 HES6Q96HZ4 224 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 CYP3A43Q9HB55 503 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 GOLGA2P5Q9HBQ8 144 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 NOD1Q9Y239 953 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 TRIM17Q9Y577 477 aa15.8■□□□□ 0.12
CDK5RAP3-218ENST00000580391 MOXD2PA6NHM9 499 aa15.79■□□□□ 0.12
CDK5RAP3-218ENST00000580391 CD52P31358 61 aa15.79■□□□□ 0.12
CDK5RAP3-218ENST00000580391 PTK7Q13308 1070 aa15.79■□□□□ 0.12
CDK5RAP3-218ENST00000580391 MESDQ14696 234 aa15.79■□□□□ 0.12
CDK5RAP3-218ENST00000580391 FBXO47Q5MNV8 452 aa15.79■□□□□ 0.12
CDK5RAP3-218ENST00000580391 C9orf57Q5W0N0 161 aa15.79■□□□□ 0.12
CDK5RAP3-218ENST00000580391 FBXO38Q6PIJ6 1188 aa15.79■□□□□ 0.12
CDK5RAP3-218ENST00000580391 MMS22LQ6ZRQ5 1243 aa15.79■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ZNF572Q7Z3I7 529 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-218ENST00000580391 SH3TC2Q8TF17 1288 aa15.79■□□□□ 0.12
CDK5RAP3-218ENST00000580391 GLT1D1Q96MS3 346 aa15.79■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ANKZF1Q9H8Y5 726 aa15.79■□□□□ 0.12
CDK5RAP3-218ENST00000580391 AVENQ9NQS1 362 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-218ENST00000580391 FAM105AQ9NUU6 356 aa15.79■□□□□ 0.12
CDK5RAP3-218ENST00000580391 UVRAGQ9P2Y5 699 aa15.79■□□□□ 0.12
CDK5RAP3-218ENST00000580391 A0A1W2PQ45 241 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 A0A1W2PQY0 241 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 TLR3O15455 904 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 RPLP2P05387 115 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 RHOXF2BP0C7M4 288 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 KCNE1P15382 129 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 MYO1EQ12965 1108 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 PTP4A2Q12974 167 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 PHF13Q86YI8 300 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 GPR161Q8N6U8 529 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 TRIM11Q96F44 468 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 RPGRIP1Q96KN7 1286 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ZFP42Q96MM3 310 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 RHOXF2Q9BQY4 288 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 TRIM7Q9C029 511 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ERVK-5Q9HDB9 667 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ADAM22Q9P0K1 906 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 PCDHGC3Q9UN70 934 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 SNX9Q9Y5X1 595 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ALG6Q9Y672 507 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 PTGESO14684 152 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 DDX3YO15523 660 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 PAEPP09466 180 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 MYBL1P10243 752 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 NDST1P52848 882 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 PRMT2P55345 433 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 PTPN11Q06124 597 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 INCA1Q0VD86 236 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ARHGEF6Q15052 776 aa15.78■□□□□ 0.12
CDK5RAP3-218ENST00000580391 DENND1BQ6P3S1 775 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms