RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 C1orf112Q9NSG2 853 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 RBM12Q9NTZ6 932 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 PADI3Q9ULW8 664 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 POLIQ9UNA4 740 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 RRP15Q9Y3B9 282 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 KBTBD13C9JR72 458 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 DDX3XO00571 662 aaKnown RBP eCLIP13.56□□□□□ -0.241e-8■■■□□ 15.4
CDK5RAP3-217ENST00000580287 PPEF2O14830 753 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 MGEA5O60502 916 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 SYF2O95926 243 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 TUBBP07437 444 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 PRLRP16471 622 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 CD58P19256 250 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 GGCXP38435 758 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 GRM5P41594 1212 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 PRKCIP41743 596 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 TRPC3Q13507 836 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 TRADDQ15628 312 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 TRIM71Q2Q1W2 868 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 SMG8Q8ND04 991 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 SELENOOQ9BVL4 669 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 RABEP2Q9H5N1 569 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 FAM204AQ9H8W3 233 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 GOLGA2P5Q9HBQ8 144 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 TAS2R14Q9NYV8 317 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 IPPQ9Y573 584 aa13.56□□□□□ -0.24
CDK5RAP3-217ENST00000580287 GRID2IPA4D2P6 1211 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 CABYRO75952 493 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 H2AFZP0C0S5 128 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 ABCB4P21439 1286 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 IGFBP6P24592 240 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 RAP1GAPP47736 663 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 LBX1P52954 281 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 MFAP3P55082 362 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 CDH8P55286 799 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 CFAP221Q4G0U5 840 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 C10orf76Q5T2E6 689 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 H2AFVQ71UI9 128 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 RNF169Q8NCN4 708 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 LNX1Q8TBB1 728 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 TAF4BQ92750 862 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 ANKRD36BP1Q96IX9 119 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 XYLT2Q9H1B5 865 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 TUBGCP4Q9UGJ1 667 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 HPCAL4Q9UM19 191 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 RNF40O75150 1001 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 ASS1P00966 412 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 TNNC2P02585 160 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 CKBP12277 381 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 MCM3P25205 808 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 POLR2BP30876 1174 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 ORC1Q13415 861 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 LPIN1Q14693 890 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 MBTPS1Q14703 1052 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 TMEM132DQ14C87 1099 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 FBXO47Q5MNV8 452 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 NOP9Q86U38 636 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 CXorf38Q8TB03 319 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 SHC3Q92529 594 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 PCDHGC5Q9Y5F6 944 aa13.55□□□□□ -0.24
CDK5RAP3-217ENST00000580287 KIAA0100Q14667 2235 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 ANKRD65E5RJM6 399 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 ARVCFO00192 962 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 KCNK3O14649 394 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 PQBP1O60828 265 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 IL18RAPO95256 599 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 PTK7Q13308 1070 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 CUL2Q13617 745 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 WDR72Q3MJ13 1102 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 DCAF4L1Q3SXM0 396 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 MAP9Q49MG5 647 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 HSP90B2PQ58FF3 399 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 CCNI2Q6ZMN8 369 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 FAM71AQ8IYT1 594 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 TSEN34Q9BSV6 310 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 CHORDC1Q9UHD1 332 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 AGAP1Q9UPQ3 857 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 PCDHB2Q9Y5E7 798 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 CFHP08603 1231 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 CDR1P51861 262 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 RPS6KA1Q15418 735 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 IFI16Q16666 785 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 MEI1Q5TIA1 1274 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 TMEM270Q6UE05 265 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 SND1Q7KZF4 910 aaKnown RBP eCLIP13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 DIS3LQ8TF46 1054 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 PHF24Q9UPV7 400 aa13.54□□□□□ -0.24
CDK5RAP3-217ENST00000580287 TARSL2A2RTX5 802 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 MMEP08473 750 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 CCDC172P0C7W6 258 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 ACO1P21399 889 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 TNFAIP3P21580 790 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 ENPEPQ07075 957 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 SURF1Q15526 300 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 ZNF699Q32M78 642 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 C8orf74Q6P047 294 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 LEKR1Q6ZMV7 388 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 SNX27Q96L92 541 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 ASB7Q9H672 318 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 DPP3Q9NY33 737 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms