RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 YIPF1Q9Y548 306 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 ASB3Q9Y575 518 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 PIAS3Q9Y6X2 628 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 DMXL1Q9Y485 3027 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 VWA3AA6NCI4 1184 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 HNRNPDLO14979 420 aaKnown RBP14.52□□□□□ -0.09
TRAF4-214ENST00000580073 OAZ2O95190 189 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 SEC24AO95486 1093 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 ODC1P11926 461 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 TYMPP19971 482 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 ANP32AP39687 249 aaKnown RBP14.52□□□□□ -0.09
TRAF4-214ENST00000580073 ALDH1A3P47895 512 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 MYBPC2Q14324 1141 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 SLC39A14Q15043 492 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 SLC10A6Q3KNW5 377 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 ARHGAP15Q53QZ3 475 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 VITQ6UXI7 678 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 DSTYKQ6XUX3 929 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 USP49Q70CQ1 688 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 ITIH5Q86UX2 942 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 MAP4K3Q8IVH8 894 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 MFSD6LQ8IWD5 586 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 LINC00301Q8NCQ3 95 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 BEST2Q8NFU1 509 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 LRRC15Q8TF66 581 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 KCNN1Q92952 543 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 CALML4Q96GE6 196 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 AK8Q96MA6 479 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 CLIC6Q96NY7 704 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 GCNAQ96QF7 691 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 PLA2G2FQ9BZM2 168 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 C8orf33Q9H7E9 229 aaPredicted RBP14.52□□□□□ -0.09
TRAF4-214ENST00000580073 HSFX1Q9UBD0 423 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 TUBGCP4Q9UGJ1 667 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 ZMYM5Q9UJ78 669 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 SCN1AP35498 2009 aa14.52□□□□□ -0.09
TRAF4-214ENST00000580073 CEP250Q9BV73 2442 aa14.51□□□□□ -0.09
TRAF4-214ENST00000580073 DPYSL4O14531 572 aa14.51□□□□□ -0.09
TRAF4-214ENST00000580073 FOXD2O60548 495 aaPredicted RBP14.51□□□□□ -0.09
TRAF4-214ENST00000580073 LRP3O75074 770 aa14.51□□□□□ -0.09
TRAF4-214ENST00000580073 BMP15O95972 392 aa14.51□□□□□ -0.09
TRAF4-214ENST00000580073 PDIA4P13667 645 aaKnown RBP14.51□□□□□ -0.09
TRAF4-214ENST00000580073 AARSP49588 968 aaKnown RBP eCLIP14.51□□□□□ -0.09
TRAF4-214ENST00000580073 NCKAP1LP55160 1127 aa14.51□□□□□ -0.09
TRAF4-214ENST00000580073 MTAPQ13126 283 aa14.51□□□□□ -0.09
TRAF4-214ENST00000580073 VEPH1Q14D04 833 aa14.51□□□□□ -0.09
TRAF4-214ENST00000580073 LAIR1Q6GTX8 287 aa14.51□□□□□ -0.09
TRAF4-214ENST00000580073 OVOS1Q6IE37 1185 aa14.51□□□□□ -0.09
TRAF4-214ENST00000580073 ARMCX5Q6P1M9 558 aa14.51□□□□□ -0.09
TRAF4-214ENST00000580073 CELF5Q8N6W0 485 aaKnown RBP14.51□□□□□ -0.09
TRAF4-214ENST00000580073 RASSF8Q8NHQ8 419 aa14.51□□□□□ -0.09
TRAF4-214ENST00000580073 TCEAL4Q96EI5 215 aa14.51□□□□□ -0.09
TRAF4-214ENST00000580073 PNMA5Q96PV4 448 aa14.51□□□□□ -0.09
TRAF4-214ENST00000580073 RPF1Q9H9Y2 349 aaKnown RBP14.51□□□□□ -0.09
TRAF4-214ENST00000580073 DSEQ9UL01 958 aa14.51□□□□□ -0.09
TRAF4-214ENST00000580073 USP18Q9UMW8 372 aa14.51□□□□□ -0.09
TRAF4-214ENST00000580073 TTC26A0AVF1 554 aa14.5□□□□□ -0.09
TRAF4-214ENST00000580073 K7ENM7 598 aa14.5□□□□□ -0.09
TRAF4-214ENST00000580073 OGTO15294 1046 aa14.5□□□□□ -0.09
TRAF4-214ENST00000580073 CHADO15335 359 aa14.5□□□□□ -0.09
TRAF4-214ENST00000580073 FAM13AO94988 1023 aa14.5□□□□□ -0.09
TRAF4-214ENST00000580073 PLA2G4BP0C869 781 aa14.5□□□□□ -0.09
TRAF4-214ENST00000580073 IGFBP6P24592 240 aaPredicted RBP14.5□□□□□ -0.09
TRAF4-214ENST00000580073 RAD51AP2Q09MP3 1159 aa14.5□□□□□ -0.09
TRAF4-214ENST00000580073 GPR17Q13304 367 aa14.5□□□□□ -0.09
TRAF4-214ENST00000580073 RSPO4Q2I0M5 234 aaPredicted RBP14.5□□□□□ -0.09
TRAF4-214ENST00000580073 RNF19BQ6ZMZ0 732 aa14.5□□□□□ -0.09
TRAF4-214ENST00000580073 KCNK18Q7Z418 384 aa14.5□□□□□ -0.09
TRAF4-214ENST00000580073 DCLK2Q8N568 766 aa14.5□□□□□ -0.09
TRAF4-214ENST00000580073 ZBTB45Q96K62 511 aaPredicted RBP14.5□□□□□ -0.09
TRAF4-214ENST00000580073 RTKNQ9BST9 563 aa14.5□□□□□ -0.09
TRAF4-214ENST00000580073 OBP2AQ9NY56 170 aa14.5□□□□□ -0.09
TRAF4-214ENST00000580073 CEP72Q9P209 647 aa14.5□□□□□ -0.09
TRAF4-214ENST00000580073 MORC2Q9Y6X9 1032 aaPredicted RBP14.5□□□□□ -0.09
TRAF4-214ENST00000580073 HELZP42694 1942 aaKnown RBP14.5□□□□□ -0.09
TRAF4-214ENST00000580073 SFI1A8K8P3 1242 aa14.49□□□□□ -0.09
TRAF4-214ENST00000580073 HEPACAM2A8MVW5 462 aa14.49□□□□□ -0.09
TRAF4-214ENST00000580073 TBCAO75347 108 aaKnown RBP14.49□□□□□ -0.09
TRAF4-214ENST00000580073 KRT18P05783 430 aaKnown RBP14.49□□□□□ -0.09
TRAF4-214ENST00000580073 CNR2P34972 360 aa14.49□□□□□ -0.09
TRAF4-214ENST00000580073 CCR2P41597 374 aa14.49□□□□□ -0.09
TRAF4-214ENST00000580073 KPNA1P52294 538 aaPredicted RBP14.49□□□□□ -0.09
TRAF4-214ENST00000580073 SLC12A3P55017 1021 aa14.49□□□□□ -0.09
TRAF4-214ENST00000580073 PLCB2Q00722 1185 aa14.49□□□□□ -0.09
TRAF4-214ENST00000580073 SMARCB1Q12824 385 aa14.49□□□□□ -0.09
TRAF4-214ENST00000580073 TEAD2Q15562 447 aa14.49□□□□□ -0.09
TRAF4-214ENST00000580073 ARHGAP29Q52LW3 1261 aa14.49□□□□□ -0.09
TRAF4-214ENST00000580073 DGKKQ5KSL6 1271 aa14.49□□□□□ -0.09
TRAF4-214ENST00000580073 METTL23Q86XA0 190 aa14.49□□□□□ -0.09
TRAF4-214ENST00000580073 HS6ST3Q8IZP7 471 aa14.49□□□□□ -0.09
TRAF4-214ENST00000580073 SHKBP1Q8TBC3 707 aa14.49□□□□□ -0.09
TRAF4-214ENST00000580073 C2orf15Q8WU43 125 aaKnown RBP14.49□□□□□ -0.09
TRAF4-214ENST00000580073 ZNF396Q96N95 335 aaPredicted RBP14.49□□□□□ -0.09
TRAF4-214ENST00000580073 PGLYRP2Q96PD5 576 aa14.49□□□□□ -0.09
TRAF4-214ENST00000580073 PARVGQ9HBI0 331 aa14.49□□□□□ -0.09
TRAF4-214ENST00000580073 DERAQ9Y315 318 aa14.49□□□□□ -0.09
TRAF4-214ENST00000580073 SRPRBQ9Y5M8 271 aaKnown RBP14.49□□□□□ -0.09
TRAF4-214ENST00000580073 A0A1W2PRU2 124 aa14.48□□□□□ -0.09
TRAF4-214ENST00000580073 MED19A0JLT2 244 aaPredicted RBP14.48□□□□□ -0.09
TRAF4-214ENST00000580073 PIGRP01833 764 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms