RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 MEIS2O14770 477 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 KIF4AO95239 1232 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 GJA4P35212 333 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 CD97P48960 835 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 NCAPHQ15003 741 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 ALX1Q15699 326 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 INAVAQ3KP66 663 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 ARL13BQ3SXY8 428 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 SWSAP1Q6NVH7 229 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 ANKS3Q6ZW76 656 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 GSTCDQ8NEC7 633 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 PI4K2BQ8TCG2 481 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 DDX27Q96GQ7 796 aaKnown RBP6.76□□□□□ -1.33
CCDC178-209ENST00000579947 MXRA8Q9BRK3 442 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 NFE2L3Q9Y4A8 694 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 OTOGQ6ZRI0 2925 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 IGHV1OR15-9A0A0B4J2B8 117 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 VPS37CA5D8V6 355 aaPredicted RBP6.76□□□□□ -1.33
CCDC178-209ENST00000579947 PAPSS1O43252 624 aaPredicted RBP6.76□□□□□ -1.33
CCDC178-209ENST00000579947 U2AF2P26368 475 aaKnown RBP eCLIP6.76□□□□□ -1.33
CCDC178-209ENST00000579947 CASRP41180 1078 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 ASIC1P78348 528 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 NAIF1Q69YI7 327 aaPredicted RBP6.76□□□□□ -1.33
CCDC178-209ENST00000579947 CCDC81Q6ZN84 652 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 STAG2Q8N3U4 1231 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 ZNF564Q8TBZ8 553 aaPredicted RBP6.76□□□□□ -1.33
CCDC178-209ENST00000579947 SSC4DQ8WTU2 575 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 FAM20AQ96MK3 541 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 ZFP42Q96MM3 310 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 PIGSQ96S52 555 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 ARHGAP9Q9BRR9 750 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 RIOX1Q9H6W3 641 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 C1orf115Q9H7X2 142 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 CYP4F11Q9HBI6 524 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 PCNX1Q96RV3 2341 aa6.76□□□□□ -1.33
CCDC178-209ENST00000579947 A0A1W2PRU2 124 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 KLRF2D3W0D1 207 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 ENC1O14682 589 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 PCDHGA12O60330 932 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 PRAMEF12O95522 483 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 FGF19O95750 216 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 HOXA11P31270 313 aaPredicted RBP6.75□□□□□ -1.33
CCDC178-209ENST00000579947 PDGFRLQ15198 375 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 STXBP5Q5T5C0 1151 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 TPGS2Q68CL5 300 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 USP17L6PQ6QN14 398 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 DCBLD1Q8N8Z6 715 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 SLC7A3Q8WY07 619 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 RABGGTAQ92696 567 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 CCDC51Q96ER9 411 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 EBF3Q9H4W6 596 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 K7EQS6 105 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 GLDCP23378 1020 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 USP11P51784 963 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 SKOR1P84550 965 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 TWF1Q12792 350 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 TUSC3Q13454 348 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 SLC35G1Q2M3R5 365 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 TSHZ3Q63HK5 1081 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 RGL4Q8IZJ4 473 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 CPA6Q8N4T0 437 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 DNASE2BQ8WZ79 361 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 FOXJ1Q92949 421 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 PAAF1Q9BRP4 392 aa6.75□□□□□ -1.33
CCDC178-209ENST00000579947 REPIN1Q9BWE0 567 aaKnown RBP6.75□□□□□ -1.33
CCDC178-209ENST00000579947 TRIM66O15016 1216 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 ARSAP15289 507 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 CCDC184Q52MB2 194 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 ARHGAP15Q53QZ3 475 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 EOGTQ5NDL2 527 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 CEP85Q6P2H3 762 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 HOMER1Q86YM7 354 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 GPIHBP1Q8IV16 184 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 CCDC33Q8N5R6 958 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 PIGOQ8TEQ8 1089 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 HASPINQ8TF76 798 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 SEC62Q99442 399 aaKnown RBP6.74□□□□□ -1.33
CCDC178-209ENST00000579947 SLC25A18Q9H1K4 315 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 TMEM189-UBE2V1I3L0A0 370 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 ACADVLP49748 655 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 C1QBPQ07021 282 aaKnown RBP6.74□□□□□ -1.33
CCDC178-209ENST00000579947 PLD1Q13393 1074 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 ILKQ13418 452 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 ZMYM1Q5SVZ6 1142 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 IGF2-ASQ6U949 168 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 MAMDC2Q7Z304 686 aaPredicted RBP6.74□□□□□ -1.33
CCDC178-209ENST00000579947 HMGB4Q8WW32 186 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 MIB2Q96AX9 1013 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.74□□□□□ -1.33
CCDC178-209ENST00000579947 MAD2L2Q9UI95 211 aa6.74□□□□□ -1.33
CCDC178-209ENST00000579947 SETD2Q9BYW2 2564 aaPredicted RBP6.74□□□□□ -1.33
CCDC178-209ENST00000579947 IGKV6-21A0A0C4DH24 114 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 AGFG2O95081 481 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 TRIM27P14373 513 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 DRP2Q13474 957 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 SF3A1Q15459 793 aaKnown RBP6.73□□□□□ -1.33
CCDC178-209ENST00000579947 SKIDA1Q1XH10 827 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 GPR158Q5T848 1215 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 TRIM68Q6AZZ1 485 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 HACE1Q8IYU2 909 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms