RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ANP32BQ92688 251 aaKnown RBP8.65□□□□□ -1.03
COPS3-215ENST00000578317 SNX27Q96L92 541 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 POP1Q99575 1024 aaKnown RBP8.65□□□□□ -1.03
COPS3-215ENST00000578317 CGRRF1Q99675 332 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 TMEM117Q9H0C3 514 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 NXF3Q9H4D5 531 aaKnown RBP8.65□□□□□ -1.03
COPS3-215ENST00000578317 PRDM5Q9NQX1 630 aaPredicted RBP8.65□□□□□ -1.03
COPS3-215ENST00000578317 TMEM161AQ9NX61 479 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 HES2Q9Y543 173 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 TRIP12Q14669 1992 aaPredicted RBP8.65□□□□□ -1.03
COPS3-215ENST00000578317 SMIM28A0A1B0GU29 152 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 BAIAP3O94812 1187 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 IL2RAP01589 272 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 TRIM49P0CI25 452 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 TRIM49CP0CI26 452 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 DLATP10515 647 aaKnown RBP8.64□□□□□ -1.03
COPS3-215ENST00000578317 CSF2RAP15509 400 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 CYP3A5P20815 502 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 AKAP5P24588 427 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 EIF1AXP47813 144 aaKnown RBP8.64□□□□□ -1.03
COPS3-215ENST00000578317 PPIGQ13427 754 aaKnown RBP eCLIP8.64□□□□□ -1.03
COPS3-215ENST00000578317 EXOC3L4Q17RC7 722 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 CBWD6Q4V339 395 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 DCAF17Q5H9S7 520 aaPredicted RBP8.64□□□□□ -1.03
COPS3-215ENST00000578317 FIGNQ5HY92 759 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 CBWD3Q5JTY5 395 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 CBWD5Q5RIA9 395 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 GBP6Q6ZN66 633 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 GSTCDQ8NEC7 633 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 IQCDQ96DY2 449 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 FAXDC2Q96IV6 333 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 IL23AQ9NPF7 189 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 PLCB1Q9NQ66 1216 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 SIK3Q9Y2K2 1263 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 DAAM1Q9Y4D1 1078 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 ITIH6Q6UXX5 1313 aa8.64□□□□□ -1.03
COPS3-215ENST00000578317 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.63□□□□□ -1.03
COPS3-215ENST00000578317 TNFRSF10BO14763 440 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 XPOTO43592 962 aaKnown RBP8.63□□□□□ -1.03
COPS3-215ENST00000578317 OFD1O75665 1012 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 GCLMP48507 274 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 MXI1P50539 228 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 KCNMA1Q12791 1236 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 TCTN1Q2MV58 587 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 SPECC1LQ69YQ0 1117 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 DPY19L2P1Q6NXN4 242 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 C16orf59Q7L2K0 433 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 TRAPPC11Q7Z392 1133 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 DEFB128Q7Z7B8 93 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 VSTM4Q8IW00 320 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 EFCAB13Q8IY85 973 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 FBXL13Q8NEE6 735 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 OR5B17Q8NGF7 314 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 LMO3Q8TAP4 145 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 CXorf38Q8TB03 319 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 MYO19Q96H55 970 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 ANKRD36BP1Q96IX9 119 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 ZMAT2Q96NC0 199 aaKnown RBP8.63□□□□□ -1.03
COPS3-215ENST00000578317 NUP58Q9BVL2 599 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 EDEM3Q9BZQ6 932 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 SLC38A7Q9NVC3 462 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 RAB20Q9NX57 234 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 KANSL3Q9P2N6 904 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 PARP2Q9UGN5 583 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 FBXL5Q9UKA1 691 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 UBQLN1Q9UMX0 589 aaKnown RBP8.63□□□□□ -1.03
COPS3-215ENST00000578317 PCDHB7Q9Y5E2 793 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 MYH11P35749 1972 aa8.63□□□□□ -1.03
COPS3-215ENST00000578317 FAM187AA6NFU0 413 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 ARL5CA6NH57 179 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 PES1O00541 588 aaKnown RBP8.62□□□□□ -1.03
COPS3-215ENST00000578317 PTGESO14684 152 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 ZC3H11AO75152 810 aaKnown RBP eCLIP8.62□□□□□ -1.03
COPS3-215ENST00000578317 AVPP01185 164 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 TNNC2P02585 160 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 THP07101 528 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 ADH1AP07327 375 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 ACTN1P12814 892 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 PON1P27169 355 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 ATICP31939 592 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 TFAMQ00059 246 aaKnown RBP8.62□□□□□ -1.03
COPS3-215ENST00000578317 TMEM132DQ14C87 1099 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 SYCP1Q15431 976 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 EPC2Q52LR7 807 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 TDRD10Q5VZ19 366 aaKnown RBP8.62□□□□□ -1.03
COPS3-215ENST00000578317 JADE1Q6IE81 842 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 GLB1LQ6UWU2 654 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 BEST2Q8NFU1 509 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 BADQ92934 168 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 TOP1MTQ969P6 601 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 PDLIM2Q96JY6 352 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 DMRTB1Q96MA1 342 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 PPP1R10Q96QC0 940 aaKnown RBP8.62□□□□□ -1.03
COPS3-215ENST00000578317 GAD1Q99259 594 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 RSAD1Q9HA92 442 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 IMPACTQ9P2X3 320 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.62□□□□□ -1.03
COPS3-215ENST00000578317 PTPRJQ12913 1337 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 ALPK3Q96L96 1907 aa8.62□□□□□ -1.03
COPS3-215ENST00000578317 SIP14410 1827 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms