RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 CLSTN1O94985 981 aa12.02□□□□□ -0.49
TRAPPC8-204ENST00000578252 CST3P01034 146 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC8-204ENST00000578252 SLC11A1P49279 550 aa12.02□□□□□ -0.49
TRAPPC8-204ENST00000578252 CLCNKBP51801 687 aa12.02□□□□□ -0.49
TRAPPC8-204ENST00000578252 BCAR1P56945 870 aa12.02□□□□□ -0.49
TRAPPC8-204ENST00000578252 MYL6P60660 151 aa12.02□□□□□ -0.49
TRAPPC8-204ENST00000578252 SYCP1Q15431 976 aa12.02□□□□□ -0.49
TRAPPC8-204ENST00000578252 RAB30Q15771 203 aa12.02□□□□□ -0.49
TRAPPC8-204ENST00000578252 ZNF667Q5HYK9 610 aa12.02□□□□□ -0.49
TRAPPC8-204ENST00000578252 CLP1Q92989 425 aaKnown RBP12.02□□□□□ -0.49
TRAPPC8-204ENST00000578252 MRFAP1L1Q96HT8 127 aa12.02□□□□□ -0.49
TRAPPC8-204ENST00000578252 PCMTD1Q96MG8 357 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC8-204ENST00000578252 SAMD11Q96NU1 681 aa12.02□□□□□ -0.49
TRAPPC8-204ENST00000578252 NT5C1BQ96P26 610 aa12.02□□□□□ -0.49
TRAPPC8-204ENST00000578252 DNAJB4Q9UDY4 337 aa12.02□□□□□ -0.49
TRAPPC8-204ENST00000578252 NUB1Q9Y5A7 615 aa12.02□□□□□ -0.49
TRAPPC8-204ENST00000578252 PCDHB12Q9Y5F1 795 aa12.02□□□□□ -0.49
TRAPPC8-204ENST00000578252 MRPL42Q9Y6G3 142 aaKnown RBP12.02□□□□□ -0.49
TRAPPC8-204ENST00000578252 SCN1AP35498 2009 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 KPNA7A9QM74 516 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 NRP1O14786 923 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 TEX33O43247 280 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 B4GALT3O60512 393 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 TADA2AO75478 443 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 GALTP07902 379 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 TBXAS1P24557 533 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 PON1P27169 355 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 AARSP49588 968 aaKnown RBP eCLIP12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 ZNF75DP51815 510 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 LILRA4P59901 499 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 TNNC1P63316 161 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 NOP14P78316 857 aaKnown RBP12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 ELAVL2Q12926 359 aaKnown RBP12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 TRIM65Q6PJ69 517 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 BLOC1S3Q6QNY0 202 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 KCNT2Q6UVM3 1135 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 ENOSF1Q7L5Y1 443 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 DPH6Q7L8W6 267 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 TTC39CQ8N584 583 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 COLGALT1Q8NBJ5 622 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 NEK11Q8NG66 645 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 LMO3Q8TAP4 145 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 ANP32BQ92688 251 aaKnown RBP12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 SEMA4DQ92854 862 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 JAKMIP2Q96AA8 810 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 FAM84AQ96KN4 292 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 CRACR2AQ9BSW2 395 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 NIF3L1Q9GZT8 377 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 XYLT2Q9H1B5 865 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 PRO3102Q9H379 93 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 GDAP2Q9NXN4 497 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 APEX2Q9UBZ4 518 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 MSRAQ9UJ68 235 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 ADAM28Q9UKQ2 775 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 SIK3Q9Y2K2 1263 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 SF3B1O75533 1304 aaKnown RBP eCLIP12.01□□□□□ -0.492e-6■■■■■ 43.1
TRAPPC8-204ENST00000578252 ITIH6Q6UXX5 1313 aa12.01□□□□□ -0.49
TRAPPC8-204ENST00000578252 LINC01553A4QN01 128 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 PPEF2O14830 753 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 KIF4AO95239 1232 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 FAM163BP0C2L3 166 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 SLC9A1P19634 815 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 PBX1P40424 430 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 YWHAEP62258 255 aaKnown RBP12□□□□□ -0.49
TRAPPC8-204ENST00000578252 SMAD3P84022 425 aaKnown RBP12□□□□□ -0.49
TRAPPC8-204ENST00000578252 GCNT1Q02742 428 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 KCNMA1Q12791 1236 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 TRIM14Q14142 442 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 WDR72Q3MJ13 1102 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 FIGNQ5HY92 759 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 SPECC1LQ69YQ0 1117 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 DSTYKQ6XUX3 929 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 SPATA18Q8TC71 538 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 TMEM169Q96HH4 297 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 SUSD3Q96L08 255 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 PAAF1Q9BRP4 392 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 NUP58Q9BVL2 599 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 LSM14BQ9BX40 385 aaKnown RBP12□□□□□ -0.49
TRAPPC8-204ENST00000578252 PLVAPQ9BX97 442 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 EDEM3Q9BZQ6 932 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 DNAI2Q9GZS0 605 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 CYP3A43Q9HB55 503 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 SPG21Q9NZD8 308 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 FBXL5Q9UKA1 691 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 DSEQ9UL01 958 aa12□□□□□ -0.49
TRAPPC8-204ENST00000578252 PRG3Q9Y2Y8 225 aaPredicted RBP12□□□□□ -0.49
TRAPPC8-204ENST00000578252 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12□□□□□ -0.49
TRAPPC8-204ENST00000578252 AP5Z1O43299 807 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 HUS1O60921 280 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 ADCY5O95622 1261 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 RB1P06400 928 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 TPM1P09493 284 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 ODC1P11926 461 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 TRIM21P19474 475 aaKnown RBP11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 CDC25BP30305 580 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 RABGGTBP53611 331 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 MFAP3P55082 362 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 KRT17Q04695 432 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 CUL2Q13617 745 aa11.99□□□□□ -0.49
TRAPPC8-204ENST00000578252 FAM109BQ6ICB4 259 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms