RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 PPP1R2P41236 205 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 RPL11P62913 178 aaKnown RBP5.42□□□□□ -1.54
IFT20-205ENST00000578009 FANCCQ00597 558 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 AMPD3Q01432 767 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 NFATC3Q12968 1075 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 FHL2Q14192 279 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 KCNB1Q14721 858 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 NOLC1Q14978 699 aaKnown RBP eCLIP5.42□□□□□ -1.54
IFT20-205ENST00000578009 TNIP1Q15025 636 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 PPP2R5EQ16537 467 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 IL17AQ16552 155 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 ABCB5Q2M3G0 1257 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 SPECC1Q5M775 1068 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 SPATA1Q5VX52 437 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 KIAA1211LQ6NV74 962 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 CNNM4Q6P4Q7 775 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 MOXD1Q6UVY6 613 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 CCDC186Q7Z3E2 898 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 RIOX2Q8IUF8 465 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 NIM1KQ8IY84 436 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 LRRC47Q8N1G4 583 aaKnown RBP5.42□□□□□ -1.54
IFT20-205ENST00000578009 IGSF22Q8N9C0 903 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 Q8TCH9 128 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 ZCCHC14Q8WYQ9 949 aaKnown RBP5.42□□□□□ -1.54
IFT20-205ENST00000578009 CUL5Q93034 780 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 DHX58Q96C10 678 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 MBOAT7Q96N66 472 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 MTMR9Q96QG7 549 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 RAB34Q9BZG1 259 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 UBA5Q9GZZ9 404 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 MTFR1LQ9H019 292 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 HSD3B7Q9H2F3 369 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 TDRD3Q9H7E2 651 aaKnown RBP5.42□□□□□ -1.54
IFT20-205ENST00000578009 BARX1Q9HBU1 254 aaPredicted RBP5.42□□□□□ -1.54
IFT20-205ENST00000578009 VAT1LQ9HCJ6 419 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 ZNF70Q9UC06 446 aaPredicted RBP5.42□□□□□ -1.54
IFT20-205ENST00000578009 TMX2Q9Y320 296 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 EMC9Q9Y3B6 208 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 TESMINQ9Y4I5 508 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 CD2APQ9Y5K6 639 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 TIMM13Q9Y5L4 95 aaPredicted RBP5.42□□□□□ -1.54
IFT20-205ENST00000578009 MYH6P13533 1939 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 EP400Q96L91 3159 aa5.42□□□□□ -1.54
IFT20-205ENST00000578009 GREB1LQ9C091 1923 aaPredicted RBP5.41□□□□□ -1.54
IFT20-205ENST00000578009 ANKRD34BA5PLL1 514 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 NPIPB8E9PQR5 432 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 F5H6K3 240 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 MPHOSPH10O00566 681 aaKnown RBP5.41□□□□□ -1.54
IFT20-205ENST00000578009 TUBB4AP04350 444 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 POLD1P28340 1107 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 STAT6P42226 847 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 SLC1A4P43007 532 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 ZNF280AP59817 542 aaPredicted RBP5.41□□□□□ -1.54
IFT20-205ENST00000578009 ICA1Q05084 483 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 KLRC3Q07444 240 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 TCP10Q12799 353 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 CUL4BQ13620 913 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 SEPT2Q15019 361 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 COBLL1Q53SF7 1204 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 DALRD3Q5D0E6 543 aaKnown RBP5.41□□□□□ -1.54
IFT20-205ENST00000578009 LDLRAD1Q5T700 205 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 RRAGBQ5VZM2 374 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 TRMT10BQ6PF06 316 aaKnown RBP5.41□□□□□ -1.54
IFT20-205ENST00000578009 POMZP3Q6PJE2 187 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 FOXR2Q6PJQ5 311 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 DEFB132Q7Z7B7 95 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 HOMER1Q86YM7 354 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 KLHL36Q8N4N3 616 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 PDILTQ8N807 584 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 C19orf47Q8N9M1 422 aaKnown RBP5.41□□□□□ -1.54
IFT20-205ENST00000578009 SPC24Q8NBT2 197 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 CCDC150Q8NCX0 1101 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 RASGRP4Q8TDF6 673 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 TBCKQ8TEA7 893 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 CHURC1Q8WUH1 139 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 DPF2Q92785 391 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 ERCC4Q92889 916 aaPredicted RBP5.41□□□□□ -1.54
IFT20-205ENST00000578009 PPP1R14AQ96A00 147 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 CCDC47Q96A33 483 aaKnown RBP5.41□□□□□ -1.54
IFT20-205ENST00000578009 CTAGE1Q96RT6 745 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 AMNQ9BXJ7 453 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 XPO4Q9C0E2 1151 aaKnown RBP5.41□□□□□ -1.54
IFT20-205ENST00000578009 LRRC27Q9C0I9 530 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 DEFB129Q9H1M3 183 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 TMEM60Q9H2L4 133 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 SH2D4AQ9H788 454 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 TTC12Q9H892 705 aaPredicted RBP5.41□□□□□ -1.54
IFT20-205ENST00000578009 PSTPIP2Q9H939 334 aa5.41□□□□□ -1.54
IFT20-205ENST00000578009 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.41□□□□□ -1.54
IFT20-205ENST00000578009 COA3Q9Y2R0 106 aaPredicted RBP5.41□□□□□ -1.54
IFT20-205ENST00000578009 BAZ2BQ9UIF8 2168 aaKnown RBP5.4□□□□□ -1.54
IFT20-205ENST00000578009 H7C1D1 291 aa5.4□□□□□ -1.54
IFT20-205ENST00000578009 NOP56O00567 594 aaKnown RBP5.4□□□□□ -1.54
IFT20-205ENST00000578009 TBX3O15119 743 aa5.4□□□□□ -1.54
IFT20-205ENST00000578009 FOXN1O15353 648 aa5.4□□□□□ -1.54
IFT20-205ENST00000578009 EDIL3O43854 480 aa5.4□□□□□ -1.54
IFT20-205ENST00000578009 CCNT1O60563 726 aaKnown RBP5.4□□□□□ -1.54
IFT20-205ENST00000578009 RAD17O75943 681 aa5.4□□□□□ -1.54
IFT20-205ENST00000578009 RHOBTB3O94955 611 aa5.4□□□□□ -1.54
IFT20-205ENST00000578009 NDUFB10O96000 172 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms