RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 MYBPC2Q14324 1141 aa16.75■□□□□ 0.27
SF3B3-215ENST00000577085 PARM1Q6UWI2 310 aa16.75■□□□□ 0.27
SF3B3-215ENST00000577085 NPAS3Q8IXF0 933 aa16.75■□□□□ 0.27
SF3B3-215ENST00000577085 SPATA32Q96LK8 384 aa16.75■□□□□ 0.27
SF3B3-215ENST00000577085 GDE1Q9NZC3 331 aa16.75■□□□□ 0.27
SF3B3-215ENST00000577085 WNT16Q9UBV4 365 aa16.75■□□□□ 0.27
SF3B3-215ENST00000577085 RCOR1Q9UKL0 485 aa16.75■□□□□ 0.27
SF3B3-215ENST00000577085 CA14Q9ULX7 337 aa16.75■□□□□ 0.27
SF3B3-215ENST00000577085 KPNA7A9QM74 516 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 SPTLC1O15269 473 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 ITGB3P05106 788 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 KRT19P08727 400 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 TMEM191BP0C7N4 346 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 CLCN5P51795 746 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 NUBP1P53384 320 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 EPHB3P54753 998 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 DUSP4Q13115 394 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 GPR17Q13304 367 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 CNNM4Q6P4Q7 775 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 UNC13DQ70J99 1090 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 HS2ST1Q7LGA3 356 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 EFCAB13Q8IY85 973 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 LEMD2Q8NC56 503 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 FGF14Q92915 247 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 MCRS1Q96EZ8 462 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 IRF2BPLQ9H1B7 796 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 BLZF1Q9H2G9 400 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 KIAA1586Q9HCI6 787 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 ASAH2Q9NR71 780 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 AGAP1Q9UPQ3 857 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 MYO10Q9HD67 2058 aa16.74■□□□□ 0.27
SF3B3-215ENST00000577085 ZNF233A6NK53 670 aa16.73■□□□□ 0.27
SF3B3-215ENST00000577085 MYL4P12829 197 aa16.73■□□□□ 0.27
SF3B3-215ENST00000577085 POLR2BP30876 1174 aaKnown RBP16.73■□□□□ 0.27
SF3B3-215ENST00000577085 NHLH1Q02575 133 aa16.73■□□□□ 0.27
SF3B3-215ENST00000577085 BECN1Q14457 450 aa16.73■□□□□ 0.27
SF3B3-215ENST00000577085 SURF1Q15526 300 aa16.73■□□□□ 0.27
SF3B3-215ENST00000577085 SLC5A9Q2M3M2 681 aa16.73■□□□□ 0.27
SF3B3-215ENST00000577085 SLC39A12Q504Y0 691 aa16.73■□□□□ 0.27
SF3B3-215ENST00000577085 CSGALNACT2Q8N6G5 542 aa16.73■□□□□ 0.27
SF3B3-215ENST00000577085 GLIS3Q8NEA6 775 aa16.73■□□□□ 0.27
SF3B3-215ENST00000577085 ZSWIM2Q8NEG5 633 aa16.73■□□□□ 0.27
SF3B3-215ENST00000577085 FAM200AQ8TCP9 573 aa16.73■□□□□ 0.27
SF3B3-215ENST00000577085 GPR152Q8TDT2 470 aa16.73■□□□□ 0.27
SF3B3-215ENST00000577085 ANKRD36BP1Q96IX9 119 aa16.73■□□□□ 0.27
SF3B3-215ENST00000577085 KXD1Q9BQD3 176 aa16.73■□□□□ 0.27
SF3B3-215ENST00000577085 PDE11AQ9HCR9 933 aa16.73■□□□□ 0.27
SF3B3-215ENST00000577085 AVENQ9NQS1 362 aaPredicted RBP16.73■□□□□ 0.27
SF3B3-215ENST00000577085 ITGA11Q9UKX5 1188 aa16.73■□□□□ 0.27
SF3B3-215ENST00000577085 YIPF1Q9Y548 306 aa16.73■□□□□ 0.27
SF3B3-215ENST00000577085 UBE4BO95155 1302 aa16.72■□□□□ 0.27
SF3B3-215ENST00000577085 PVALEFA0A1B0GWK0 134 aa16.72■□□□□ 0.27
SF3B3-215ENST00000577085 HUS1O60921 280 aa16.72■□□□□ 0.27
SF3B3-215ENST00000577085 TNNC2P02585 160 aa16.72■□□□□ 0.27
SF3B3-215ENST00000577085 CYP11A1P05108 521 aa16.72■□□□□ 0.27
SF3B3-215ENST00000577085 CEBPBP17676 345 aa16.72■□□□□ 0.27
SF3B3-215ENST00000577085 RBP5P82980 135 aa16.72■□□□□ 0.27
SF3B3-215ENST00000577085 BFSP1Q12934 665 aa16.72■□□□□ 0.27
SF3B3-215ENST00000577085 NELFCDQ8IXH7 590 aa16.72■□□□□ 0.27
SF3B3-215ENST00000577085 TMEM105Q8N8V8 129 aa16.72■□□□□ 0.27
SF3B3-215ENST00000577085 PRSS33Q8NF86 280 aa16.72■□□□□ 0.27
SF3B3-215ENST00000577085 ZNF507Q8TCN5 953 aa16.72■□□□□ 0.27
SF3B3-215ENST00000577085 SEPT5Q99719 369 aaPredicted RBP16.72■□□□□ 0.27
SF3B3-215ENST00000577085 RTP3Q9BQQ7 232 aa16.72■□□□□ 0.27
SF3B3-215ENST00000577085 SLITRK6Q9H5Y7 841 aa16.72■□□□□ 0.27
SF3B3-215ENST00000577085 ARHGEF3Q9NR81 526 aa16.72■□□□□ 0.27
SF3B3-215ENST00000577085 HSPBP1Q9NZL4 362 aa16.72■□□□□ 0.27
SF3B3-215ENST00000577085 SLC27A5Q9Y2P5 690 aa16.72■□□□□ 0.27
SF3B3-215ENST00000577085 MTMR11A4FU01 709 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 MICAL2O94851 1124 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 SLFN14P0C7P3 912 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 CASP1P29466 404 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 TUFMP49411 452 aaKnown RBP16.71■□□□□ 0.27
SF3B3-215ENST00000577085 SNRPFP62306 86 aaKnown RBP16.71■□□□□ 0.27
SF3B3-215ENST00000577085 TSPY1Q01534 308 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 PFKPQ01813 784 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 SMARCB1Q12824 385 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 MYO1EQ12965 1108 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 CUL4BQ13620 913 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 VEPH1Q14D04 833 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 TAF12Q16514 161 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 MGAT5BQ3V5L5 792 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 WSCD1Q658N2 575 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 CENPPQ6IPU0 288 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 ITIH5Q86UX2 942 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 DCP1BQ8IZD4 617 aaKnown RBP16.71■□□□□ 0.27
SF3B3-215ENST00000577085 LRRC52Q8N7C0 313 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 C1orf127Q8N9H9 656 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 ATAD1Q8NBU5 361 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 LEO1Q8WVC0 666 aaPredicted RBP16.71■□□□□ 0.27
SF3B3-215ENST00000577085 SHDQ96IW2 340 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 FNBP1Q96RU3 617 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 RPP25Q9BUL9 199 aaKnown RBP16.71■□□□□ 0.27
SF3B3-215ENST00000577085 MTMR12Q9C0I1 747 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 SCAND2PQ9GZW5 306 aaPredicted RBP16.71■□□□□ 0.27
SF3B3-215ENST00000577085 SLC39A2Q9NP94 309 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 SLC2A4RGQ9NR83 387 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 EXOC1Q9NV70 894 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 CEP72Q9P209 647 aa16.71■□□□□ 0.27
SF3B3-215ENST00000577085 SERTAD1Q9UHV2 236 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms