RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 IGSF22Q8N9C0 903 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 RSPRY1Q96DX4 576 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 NTPCRQ9BSD7 190 aaKnown RBP12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 LRRC3Q9BY71 257 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 PLEKHA5Q9HAU0 1116 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 OBP2AQ9NY56 170 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 USP24Q9UPU5 2620 aa12.68□□□□□ -0.38
CTDNEP1-212ENST00000576613 MYH11P35749 1972 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 GREB1Q4ZG55 1949 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 GDF9O60383 454 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 CLTAP09496 248 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 OR4Q2P0C623 313 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 CXCL8P10145 99 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 CYP3A5P20815 502 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 GUCY2CP25092 1073 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 LRPAP1P30533 357 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 PLCB2Q00722 1185 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 PPP2R3AQ06190 1150 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 MCL1Q07820 350 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 MAPK7Q13164 816 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 SEZ6Q53EL9 994 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 OVOS1Q6IE37 1185 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 RINT1Q6NUQ1 792 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 TXNDC11Q6PKC3 985 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 DSTYKQ6XUX3 929 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 ITIH5Q86UX2 942 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 WDR5BQ86VZ2 330 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 C4orf32Q8N8J7 132 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 C12orf50Q8NA57 414 aaPredicted RBP12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 FBXO18Q8NFZ0 1043 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 SPIRE2Q8WWL2 714 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 PSMG2Q969U7 264 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 KIF12Q96FN5 646 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 ZBTB45Q96K62 511 aaPredicted RBP12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 LLPHQ9BRT6 129 aaKnown RBP12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 RUSC1Q9BVN2 902 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 DNAJC25Q9H1X3 360 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 ATXN3LQ9H3M9 355 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 GTSE1Q9NYZ3 720 aa12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 UBQLN1Q9UMX0 589 aaKnown RBP12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 TIMM13Q9Y5L4 95 aaPredicted RBP12.67□□□□□ -0.38
CTDNEP1-212ENST00000576613 H0YCG3 227 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 LAD1O00515 517 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 EIF5BO60841 1220 aaKnown RBP12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 VNN2O95498 520 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 ODC1P11926 461 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 PLS3P13797 630 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 GABRR2P28476 465 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 AARSP49588 968 aaKnown RBP eCLIP12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 LIMK1P53667 647 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 CCINQ13939 588 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 MYBPC2Q14324 1141 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 VEPH1Q14D04 833 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 PON2Q15165 354 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 PTPAQ15257 358 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 KYAT1Q16773 422 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 STXBP5Q5T5C0 1151 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 GPR158Q5T848 1215 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 CENPPQ6IPU0 288 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 ARMCX5Q6P1M9 558 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 C1orf186Q6ZWK4 172 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 DNAJB7Q7Z6W7 309 aaPredicted RBP12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 TMEM161BQ8NDZ6 487 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 TTC8Q8TAM2 541 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 BPIFB1Q8TDL5 484 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 BICD1Q96G01 975 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 LOXL4Q96JB6 756 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 ZFYVE19Q96K21 471 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 GCNAQ96QF7 691 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 CRISPLD1Q9H336 500 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 THG1LQ9NWX6 298 aaKnown RBP12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 HSFX1Q9UBD0 423 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 ANGPTL2Q9UKU9 493 aa12.66□□□□□ -0.38
CTDNEP1-212ENST00000576613 CHD6Q8TD26 2715 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 CCDC163A0A0D9SF12 145 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 TTC26A0AVF1 554 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 MTMR11A4FU01 709 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 SFI1A8K8P3 1242 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 MAPTP10636 758 aaKnown RBP12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 TYMPP19971 482 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 PAX3P23760 479 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 WEE1P30291 646 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 HMGN5P82970 282 aaKnown RBP12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 SPAG1Q07617 926 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 ST3GAL1Q11201 340 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 NBR1Q14596 966 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 ZBTB6Q15916 424 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 ITPRIPL2Q3MIP1 535 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 WDR44Q5JSH3 913 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 DTHD1Q6ZMT9 781 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 GAREM2Q75VX8 874 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 GPIHBP1Q8IV16 184 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 FAM184AQ8NB25 1140 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 GAB3Q8WWW8 586 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 TSPAN18Q96SJ8 248 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 MKNK1Q9BUB5 465 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 TASP1Q9H6P5 420 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 KCND2Q9NZV8 630 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 ZMYM5Q9UJ78 669 aa12.65□□□□□ -0.38
CTDNEP1-212ENST00000576613 LIMCH1Q9UPQ0 1083 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms