RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 TFDP1Q14186 410 aa18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 ACCSLQ4AC99 568 aa18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 ERMARDQ5T6L9 678 aa18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 GALNT4Q8N4A0 578 aa18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 FEZF2Q8TBJ5 459 aa18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 SUDS3Q9H7L9 328 aaPredicted RBP18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 SAE1Q9UBE0 346 aaPredicted RBP18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 C15orf41Q9Y2V0 281 aa18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 AIM2O14862 343 aa18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 KIAA0391O15091 583 aaKnown RBP18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 SLITRK3O94933 977 aa18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 HNRNPH3P31942 346 aaKnown RBP18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 PPP3CAQ08209 521 aa18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 NOP9Q86U38 636 aaKnown RBP18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 PRPF39Q86UA1 669 aaKnown RBP18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 MSL3Q8N5Y2 521 aaKnown RBP18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 UBA3Q8TBC4 463 aa18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 RBM46Q8TBY0 533 aaKnown RBP18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 ZNF302Q9NR11 478 aa18.8■□□□□ 0.6
ATPAF1-214ENST00000576409 SNX3O60493 162 aa18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 DRD4P21917 467 aa18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 RPS6P62753 249 aaKnown RBP18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 STX3Q13277 289 aa18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 CHI3L2Q15782 390 aa18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 HEATR6Q6AI08 1181 aaKnown RBP18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 ARHGAP27Q6ZUM4 889 aa18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 NSL1Q96IY1 281 aa18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 GTSE1Q9NYZ3 720 aa18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 AUHQ13825 339 aaKnown RBP18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 LLGL2Q6P1M3 1020 aa18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 TBX20Q9UMR3 447 aa18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 NR3C2P08235 984 aa18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 SREBF1P36956 1147 aa18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 ATP13A4Q4VNC1 1196 aa18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 FAM47CQ5HY64 1035 aa18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 FBXO36Q8NEA4 188 aa18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 PSPC1Q8WXF1 523 aaKnown RBP18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 BCAS3Q9H6U6 928 aa18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 NUB1Q9Y5A7 615 aa18.79■□□□□ 0.6
ATPAF1-214ENST00000576409 MYL2P10916 166 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 GPC3P51654 580 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 NLRP11P59045 1033 aaKnown RBP18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 KCTD2Q14681 263 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 SHROOM1Q2M3G4 852 aaPredicted RBP18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 PDZD4Q76G19 769 aaPredicted RBP18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 C3orf20Q8ND61 904 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 SPDYE1Q8NFV5 336 aaPredicted RBP18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 SCFD2Q8WU76 684 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 OSBPL7Q9BZF2 842 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 SNX25Q9H3E2 840 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 NOL4O94818 638 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 ENO3P13929 434 aaPredicted RBP18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 SFNP31947 248 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 SHMT1P34896 483 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 HMGCS2P54868 508 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 SLC12A3P55017 1021 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 MED21Q13503 144 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 BTNL9Q6UXG8 535 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 TRIM72Q6ZMU5 477 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 PID1Q7Z2X4 250 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 PALB2Q86YC2 1186 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 CXorf38Q8TB03 319 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 PRMT6Q96LA8 375 aaPredicted RBP18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 WRNIP1Q96S55 665 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 STRIP2Q9ULQ0 834 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 A0A0A6YYK5 440 aaPredicted RBP18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 ZBBXA8MT70 800 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 ADORA2BP29275 332 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 BMPR2Q13873 1038 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 ANKRD20A2Q5SQ80 823 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 ANKRD20A1Q5TYW2 823 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 SYDE1Q6ZW31 735 aaPredicted RBP18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 LRRC71Q8N4P6 559 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 RXFP1Q9HBX9 757 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 JPH1Q9HDC5 661 aaPredicted RBP18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 ZFATQ9P243 1243 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 ASAP2O43150 1006 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 MAGEB18Q96M61 343 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 TTYH3Q9C0H2 523 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 TRPV6Q9H1D0 765 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 NINJ2Q9NZG7 142 aa18.78■□□□□ 0.6
ATPAF1-214ENST00000576409 ETS1P14921 441 aa18.77■□□□□ 0.6
ATPAF1-214ENST00000576409 NPTX2P47972 431 aa18.77■□□□□ 0.6
ATPAF1-214ENST00000576409 MTMR2Q13614 643 aa18.77■□□□□ 0.6
ATPAF1-214ENST00000576409 RWDD4Q6NW29 188 aaKnown RBP18.77■□□□□ 0.6
ATPAF1-214ENST00000576409 ICA1LQ8NDH6 482 aa18.77■□□□□ 0.6
ATPAF1-214ENST00000576409 PRPF31Q8WWY3 499 aaKnown RBP18.77■□□□□ 0.6
ATPAF1-214ENST00000576409 KCNQ5Q9NR82 932 aa18.77■□□□□ 0.6
ATPAF1-214ENST00000576409 DONSONQ9NYP3 566 aa18.77■□□□□ 0.6
ATPAF1-214ENST00000576409 ADCY3O60266 1144 aa18.77■□□□□ 0.6
ATPAF1-214ENST00000576409 SEC24DO94855 1032 aaPredicted RBP18.77■□□□□ 0.6
ATPAF1-214ENST00000576409 GNAT1P11488 350 aa18.77■□□□□ 0.6
ATPAF1-214ENST00000576409 PECAM1P16284 738 aaPredicted RBP18.77■□□□□ 0.6
ATPAF1-214ENST00000576409 ESRRGP62508 458 aa18.77■□□□□ 0.6
ATPAF1-214ENST00000576409 NME3Q13232 169 aa18.77■□□□□ 0.6
ATPAF1-214ENST00000576409 CNGA2Q16280 664 aa18.77■□□□□ 0.6
ATPAF1-214ENST00000576409 ACTL9Q8TC94 416 aa18.77■□□□□ 0.6
ATPAF1-214ENST00000576409 PGM2Q96G03 612 aa18.77■□□□□ 0.6
ATPAF1-214ENST00000576409 NACA2Q9H009 215 aa18.77■□□□□ 0.6
ATPAF1-214ENST00000576409 FAM49BQ9NUQ9 324 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms