RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 BORCS6Q96GS4 357 aa12.87□□□□□ -0.35
LITAF-219ENST00000576334 KCNH6Q9H252 994 aa12.87□□□□□ -0.35
LITAF-219ENST00000576334 ASB7Q9H672 318 aa12.87□□□□□ -0.35
LITAF-219ENST00000576334 PDE11AQ9HCR9 933 aa12.87□□□□□ -0.35
LITAF-219ENST00000576334 AFF4Q9UHB7 1163 aaKnown RBP12.87□□□□□ -0.35
LITAF-219ENST00000576334 NCANO14594 1321 aa12.87□□□□□ -0.35
LITAF-219ENST00000576334 PTPRJQ12913 1337 aa12.87□□□□□ -0.35
LITAF-219ENST00000576334 STK25O00506 426 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 CYB561D2O14569 222 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 HCRTO43612 131 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 POU2F2P09086 479 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 MYL4P12829 197 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 AFMP43652 599 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 ME1P48163 572 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 ASIC1P78348 528 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 SNW1Q13573 536 aaKnown RBP12.86□□□□□ -0.35
LITAF-219ENST00000576334 WSCD1Q658N2 575 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 TANGO2Q6ICL3 276 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 LRRTM3Q86VH5 581 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 BRSK2Q8IWQ3 736 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 CCDC65Q8IXS2 484 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 PYM1Q9BRP8 204 aaKnown RBP12.86□□□□□ -0.35
LITAF-219ENST00000576334 FOXQ1Q9C009 403 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 DNAJC25Q9H1X3 360 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 TNMDQ9H2S6 317 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 WNT16Q9UBV4 365 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 EXOC7Q9UPT5 735 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 DERAQ9Y315 318 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 C2CD2Q9Y426 696 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 YIPF1Q9Y548 306 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 PCDHB13Q9Y5F0 798 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 WDR87Q6ZQQ6 2873 aa12.86□□□□□ -0.35
LITAF-219ENST00000576334 MTMR11A4FU01 709 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 GALR2O43603 387 aaPredicted RBP12.85□□□□□ -0.35
LITAF-219ENST00000576334 ITGB3P05106 788 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 DCNP07585 359 aaKnown RBP12.85□□□□□ -0.35
LITAF-219ENST00000576334 ODC1P11926 461 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 AOC1P19801 751 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 TYMPP19971 482 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 CD72P21854 359 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 FCARP24071 287 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 POLR2BP30876 1174 aaKnown RBP12.85□□□□□ -0.35
LITAF-219ENST00000576334 ABCD1P33897 745 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 CLCN5P51795 746 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 PTPN5P54829 565 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 GPR17Q13304 367 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 CUL4BQ13620 913 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 GRM2Q14416 872 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 POSTNQ15063 836 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 CCDC142Q17RM4 750 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 SLC39A12Q504Y0 691 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 FAM78AQ5JUQ0 283 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 STXBP5Q5T5C0 1151 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 RESP18Q5W5W9 173 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 CENPPQ6IPU0 288 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 ARMCX5Q6P1M9 558 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 CBWD2Q8IUF1 395 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 NELFCDQ8IXH7 590 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 C1orf127Q8N9H9 656 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 STKLD1Q8NE28 680 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 CXorf38Q8TB03 319 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 NXPE3Q969Y0 559 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 LRRC3Q9BY71 257 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 TBC1D17Q9HA65 648 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 ZNF334Q9HCZ1 680 aaPredicted RBP12.85□□□□□ -0.35
LITAF-219ENST00000576334 RBAKQ9NYW8 714 aaPredicted RBP12.85□□□□□ -0.35
LITAF-219ENST00000576334 KCNH3Q9ULD8 1083 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 AGAP1Q9UPQ3 857 aa12.85□□□□□ -0.35
LITAF-219ENST00000576334 CACNA1HO95180 2353 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 OR6C75A6NL08 312 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 CLIC2O15247 247 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 IL18RAPO95256 599 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 GARTP22102 1010 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 TAF6P49848 677 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 TEAD2Q15562 447 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 PDZD4Q76G19 769 aaPredicted RBP12.84□□□□□ -0.35
LITAF-219ENST00000576334 RTL10Q7L3V2 364 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 EPM2AIP1Q7L775 607 aaPredicted RBP12.84□□□□□ -0.35
LITAF-219ENST00000576334 IQUBQ8NA54 791 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 RDH13Q8NBN7 331 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 OR5B17Q8NGF7 314 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 SHKBP1Q8TBC3 707 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 KCNG4Q8TDN1 519 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 ATOH1Q92858 354 aaPredicted RBP12.84□□□□□ -0.35
LITAF-219ENST00000576334 ZNF512Q96ME7 567 aaPredicted RBP12.84□□□□□ -0.35
LITAF-219ENST00000576334 TSPAN18Q96SJ8 248 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 C7orf25Q9BPX7 421 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 LPIN3Q9BQK8 851 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 MTMR12Q9C0I1 747 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 ARHGEF3Q9NR81 526 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 SLC2A4RGQ9NR83 387 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 TMLHEQ9NVH6 421 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 SERTAD1Q9UHV2 236 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 SIX4Q9UIU6 781 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 RCOR1Q9UKL0 485 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 MTF2Q9Y483 593 aaPredicted RBP12.84□□□□□ -0.35
LITAF-219ENST00000576334 ZFP37Q9Y6Q3 630 aaPredicted RBP12.84□□□□□ -0.35
LITAF-219ENST00000576334 CFAP54Q96N23 3096 aa12.84□□□□□ -0.35
LITAF-219ENST00000576334 FRYLO94915 3013 aa12.83□□□□□ -0.36
LITAF-219ENST00000576334 A0A1W2PRU2 124 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms