RNA–Protein interactions for RNA: ENST00000575854.5

TRAP1-214, Transcript of TNF receptor associated protein 1, humanhuman

TSL 3

Gene TRAP1, Length 595 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-214ENST00000575854 TAF4BQ92750 862 aa13.39□□□□□ -0.27
TRAP1-214ENST00000575854 SEMA4DQ92854 862 aa13.39□□□□□ -0.27
TRAP1-214ENST00000575854 ELMO3Q96BJ8 720 aa13.39□□□□□ -0.27
TRAP1-214ENST00000575854 PI4K2AQ9BTU6 479 aa13.39□□□□□ -0.27
TRAP1-214ENST00000575854 IMPG2Q9BZV3 1241 aa13.39□□□□□ -0.27
TRAP1-214ENST00000575854 NDST4Q9H3R1 872 aa13.39□□□□□ -0.27
TRAP1-214ENST00000575854 VRTNQ9H8Y1 702 aa13.39□□□□□ -0.27
TRAP1-214ENST00000575854 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.39□□□□□ -0.273e-6■■■■■ 27.8
TRAP1-214ENST00000575854 LMCD1Q9NZU5 365 aa13.39□□□□□ -0.27
TRAP1-214ENST00000575854 NXF1Q9UBU9 619 aaKnown RBP13.39□□□□□ -0.27
TRAP1-214ENST00000575854 PCDHGC5Q9Y5F6 944 aa13.39□□□□□ -0.27
TRAP1-214ENST00000575854 TIMM13Q9Y5L4 95 aaPredicted RBP13.39□□□□□ -0.27
TRAP1-214ENST00000575854 PLXNA4Q9HCM2 1894 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.38□□□□□ -0.27
TRAP1-214ENST00000575854 C2orf71A6NGG8 1288 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 LRRC10BA6NIK2 292 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 HIDE1A8MVS5 230 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 GOLGA6L19H0YKK7 550 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 HUS1O60921 280 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 LILRB3O75022 631 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 LRRN2O75325 713 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 CYP11A1P05108 521 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 ATP1A3P13637 1013 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 TYMPP19971 482 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 CA8P35219 290 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 VWA3BQ502W6 1294 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 ZNF667Q5HYK9 610 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 VARS2Q5ST30 1063 aaKnown RBP13.38□□□□□ -0.27
TRAP1-214ENST00000575854 WSCD1Q658N2 575 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 PDXDC1Q6P996 788 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 ANKS3Q6ZW76 656 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 DPH6Q7L8W6 267 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 PDCL2Q8N4E4 241 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 CCDC150Q8NCX0 1101 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 MYLIPQ8WY64 445 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 GUCD1Q96NT3 240 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 MMS19Q96T76 1030 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 TAB2Q9NYJ8 693 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 LIMA1Q9UHB6 759 aaKnown RBP13.38□□□□□ -0.27
TRAP1-214ENST00000575854 DSEQ9UL01 958 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 SSX2IPQ9Y2D8 614 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 IRAK3Q9Y616 596 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 MTCH2Q9Y6C9 303 aa13.38□□□□□ -0.27
TRAP1-214ENST00000575854 PES1O00541 588 aaKnown RBP13.37□□□□□ -0.27
TRAP1-214ENST00000575854 OAZ2O95190 189 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 TPM2P07951 284 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 P4HA1P13674 534 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 TNNC1P63316 161 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 TPM4P67936 248 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 NOP14P78316 857 aaKnown RBP13.37□□□□□ -0.27
TRAP1-214ENST00000575854 YWHAHQ04917 246 aaPredicted RBP13.37□□□□□ -0.27
TRAP1-214ENST00000575854 MRPL58Q14197 206 aaKnown RBP13.37□□□□□ -0.27
TRAP1-214ENST00000575854 SOWAHAQ2M3V2 549 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 WDR44Q5JSH3 913 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 OVOS1Q6IE37 1185 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 SPOPLQ6IQ16 392 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 PRSS55Q6UWB4 352 aaPredicted RBP13.37□□□□□ -0.27
TRAP1-214ENST00000575854 LIMS2Q7Z4I7 341 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 METTL23Q86XA0 190 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 TMEM86AQ8N2M4 240 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 TOP6BLQ8N6T0 577 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 LNX1Q8TBB1 728 aaPredicted RBP13.37□□□□□ -0.27
TRAP1-214ENST00000575854 CRACR2AQ9BSW2 395 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 ANP32EQ9BTT0 268 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 VPS16Q9H269 839 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 RXFP1Q9HBX9 757 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 APOBEC3GQ9HC16 384 aaKnown RBP13.37□□□□□ -0.27
TRAP1-214ENST00000575854 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRAP1-214ENST00000575854 L1RE1Q9UN81 338 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 POLIQ9UNA4 740 aa13.37□□□□□ -0.27
TRAP1-214ENST00000575854 GTPBP10A4D1E9 387 aaKnown RBP13.36□□□□□ -0.27
TRAP1-214ENST00000575854 H7C4K7 107 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 CNPP09543 421 aaKnown RBP13.36□□□□□ -0.27
TRAP1-214ENST00000575854 COPB1P53618 953 aaKnown RBP13.36□□□□□ -0.27
TRAP1-214ENST00000575854 CREMQ03060 361 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 LRMPQ12912 555 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 PSMD5Q16401 504 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 CTXN3Q4LDR2 81 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 SCARA5Q6ZMJ2 495 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 GBP6Q6ZN66 633 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 APTXQ7Z2E3 356 aaKnown RBP13.36□□□□□ -0.27
TRAP1-214ENST00000575854 RBM23Q86U06 439 aaKnown RBP13.36□□□□□ -0.27
TRAP1-214ENST00000575854 ADGRF2Q8IZF7 708 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 RNF214Q8ND24 703 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 EHBP1Q8NDI1 1231 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 LMO3Q8TAP4 145 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 PPP2R3CQ969Q6 453 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 CLSTN3Q9BQT9 956 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 EMILIN2Q9BXX0 1053 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 NIF3L1Q9GZT8 377 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 INTS2Q9H0H0 1204 aaKnown RBP13.36□□□□□ -0.27
TRAP1-214ENST00000575854 NSUN3Q9H649 340 aaKnown RBP13.36□□□□□ -0.27
TRAP1-214ENST00000575854 FNIP2Q9P278 1114 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 MTRRQ9UBK8 725 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 BACE2Q9Y5Z0 518 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 VWA8A3KMH1 1905 aa13.36□□□□□ -0.27
TRAP1-214ENST00000575854 TEX28O15482 410 aa13.35□□□□□ -0.27
TRAP1-214ENST00000575854 TBC1D4O60343 1298 aa13.35□□□□□ -0.27
TRAP1-214ENST00000575854 TACC1O75410 805 aa13.35□□□□□ -0.27
TRAP1-214ENST00000575854 FAM163BP0C2L3 166 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms