RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 DPYSL4O14531 572 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 PIGRP01833 764 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 TYMPP19971 482 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 SDHBP21912 280 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 VIPR2P41587 438 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 AARSP49588 968 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCDC40-210ENST00000573903 CCR3P51677 355 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 DUSP4Q13115 394 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 MTAPQ13126 283 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 GPR17Q13304 367 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 MYBPC2Q14324 1141 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 VEPH1Q14D04 833 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 ZBTB6Q15916 424 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 ENOX2Q16206 610 aaKnown RBP13.22□□□□□ -0.29
CCDC40-210ENST00000573903 ARHGAP15Q53QZ3 475 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 ARSHQ5FYA8 562 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 POTEHQ6S545 545 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 TSSK4Q6SA08 328 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 ITIH5Q86UX2 942 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 MAP4K3Q8IVH8 894 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 FAM200AQ8TCP9 573 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 KCNN1Q92952 543 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 SNX21Q969T3 373 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 INTS4Q96HW7 963 aaKnown RBP13.22□□□□□ -0.29
CCDC40-210ENST00000573903 ZSWIM3Q96MP5 696 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 GCNAQ96QF7 691 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 HAPLN2Q9GZV7 340 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 EPC1Q9H2F5 836 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 CHRDQ9H2X0 955 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 GMEB2Q9UKD1 530 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 ASB3Q9Y575 518 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 GVINP1Q7Z2Y8 2422 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 NUP210Q8TEM1 1887 aaPredicted RBP13.21□□□□□ -0.29
CCDC40-210ENST00000573903 TSC2P49815 1807 aa13.21□□□□□ -0.29
CCDC40-210ENST00000573903 SPTBN4Q9H254 2564 aa13.21□□□□□ -0.29
CCDC40-210ENST00000573903 MTMR11A4FU01 709 aa13.21□□□□□ -0.29
CCDC40-210ENST00000573903 MOSPD3O75425 235 aa13.21□□□□□ -0.29
CCDC40-210ENST00000573903 LONP1P36776 959 aaKnown RBP13.21□□□□□ -0.29
CCDC40-210ENST00000573903 GUCY2FP51841 1108 aa13.21□□□□□ -0.29
CCDC40-210ENST00000573903 KPNA1P52294 538 aaPredicted RBP13.21□□□□□ -0.29
CCDC40-210ENST00000573903 LRRC32Q14392 662 aa13.21□□□□□ -0.29
CCDC40-210ENST00000573903 TMEM132DQ14C87 1099 aa13.21□□□□□ -0.29
CCDC40-210ENST00000573903 SPATA1Q5VX52 437 aa13.21□□□□□ -0.29
CCDC40-210ENST00000573903 LARP1BQ659C4 914 aaKnown RBP13.21□□□□□ -0.29
CCDC40-210ENST00000573903 JADE1Q6IE81 842 aa13.21□□□□□ -0.29
CCDC40-210ENST00000573903 METTL23Q86XA0 190 aa13.21□□□□□ -0.29
CCDC40-210ENST00000573903 SHKBP1Q8TBC3 707 aa13.21□□□□□ -0.29
CCDC40-210ENST00000573903 SENP8Q96LD8 212 aa13.21□□□□□ -0.29
CCDC40-210ENST00000573903 C8orf33Q9H7E9 229 aaPredicted RBP13.21□□□□□ -0.29
CCDC40-210ENST00000573903 LMAN1LQ9HAT1 526 aa13.21□□□□□ -0.29
CCDC40-210ENST00000573903 DSEQ9UL01 958 aa13.21□□□□□ -0.29
CCDC40-210ENST00000573903 DERAQ9Y315 318 aa13.21□□□□□ -0.29
CCDC40-210ENST00000573903 TCHHQ07283 1943 aa13.21□□□□□ -0.3
CCDC40-210ENST00000573903 A0A0B4J269 797 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 CHADO15335 359 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 LILRB5O75023 590 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 PLCG1P19174 1290 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 CCNE1P24864 410 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 ZNF131P52739 623 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 LILRA4P59901 499 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 MCM6Q14566 821 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 TAF12Q16514 161 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 SLFN12LQ6IEE8 588 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 CENPPQ6IPU0 288 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 BRAPQ7Z569 592 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 TMC8Q8IU68 726 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 THEM5Q8N1Q8 247 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 KRI1Q8N9T8 703 aaKnown RBP13.2□□□□□ -0.3
CCDC40-210ENST00000573903 LARP4BQ92615 738 aaKnown RBP13.2□□□□□ -0.3
CCDC40-210ENST00000573903 RAD54LQ92698 747 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 NELL1Q92832 810 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 PSMG2Q969U7 264 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 SEPT5Q99719 369 aaPredicted RBP13.2□□□□□ -0.3
CCDC40-210ENST00000573903 ATXN3LQ9H3M9 355 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 ASB7Q9H672 318 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 HSFX1Q9UBD0 423 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 CPSF3Q9UKF6 684 aaKnown RBP13.2□□□□□ -0.3
CCDC40-210ENST00000573903 SLC27A5Q9Y2P5 690 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 ANK1P16157 1881 aa13.2□□□□□ -0.3
CCDC40-210ENST00000573903 VPS37CA5D8V6 355 aaPredicted RBP13.19□□□□□ -0.3
CCDC40-210ENST00000573903 NRG2O14511 850 aaPredicted RBP13.19□□□□□ -0.3
CCDC40-210ENST00000573903 FAM189A1O60320 539 aa13.19□□□□□ -0.3
CCDC40-210ENST00000573903 ADRB2P07550 413 aa13.19□□□□□ -0.3
CCDC40-210ENST00000573903 HSP90AA1P07900 732 aaKnown RBP13.19□□□□□ -0.3
CCDC40-210ENST00000573903 NFICP08651 508 aa13.19□□□□□ -0.3
CCDC40-210ENST00000573903 GABRR2P28476 465 aa13.19□□□□□ -0.3
CCDC40-210ENST00000573903 TUFMP49411 452 aaKnown RBP13.19□□□□□ -0.3
CCDC40-210ENST00000573903 MLLT6P55198 1093 aaPredicted RBP13.19□□□□□ -0.3
CCDC40-210ENST00000573903 LMNB2Q03252 620 aa13.19□□□□□ -0.3
CCDC40-210ENST00000573903 FZD5Q13467 585 aa13.19□□□□□ -0.3
CCDC40-210ENST00000573903 KARSQ15046 597 aaKnown RBP13.19□□□□□ -0.3
CCDC40-210ENST00000573903 RSPO4Q2I0M5 234 aaPredicted RBP13.19□□□□□ -0.3
CCDC40-210ENST00000573903 MGAT5BQ3V5L5 792 aa13.19□□□□□ -0.3
CCDC40-210ENST00000573903 ARHGAP29Q52LW3 1261 aa13.19□□□□□ -0.3
CCDC40-210ENST00000573903 GPR158Q5T848 1215 aa13.19□□□□□ -0.3
CCDC40-210ENST00000573903 C9orf57Q5W0N0 161 aa13.19□□□□□ -0.3
CCDC40-210ENST00000573903 ADALQ6DHV7 355 aa13.19□□□□□ -0.3
CCDC40-210ENST00000573903 MAMSTRQ6ZN01 415 aa13.19□□□□□ -0.3
CCDC40-210ENST00000573903 ARID3BQ8IVW6 561 aaPredicted RBP13.19□□□□□ -0.3
CCDC40-210ENST00000573903 TMEM130Q8N3G9 435 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms