RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 BTBD18B2RXH4 712 aa13.31□□□□□ -0.28
PRPF8-208ENST00000573716 SOAT2O75908 522 aa13.31□□□□□ -0.28
PRPF8-208ENST00000573716 YWHAHQ04917 246 aaPredicted RBP13.31□□□□□ -0.28
PRPF8-208ENST00000573716 ITPRIPL2Q3MIP1 535 aa13.31□□□□□ -0.28
PRPF8-208ENST00000573716 XKR4Q5GH76 650 aa13.31□□□□□ -0.28
PRPF8-208ENST00000573716 PLA2G2CQ5R387 149 aa13.31□□□□□ -0.28
PRPF8-208ENST00000573716 ALKAL1Q6UXT8 129 aa13.31□□□□□ -0.28
PRPF8-208ENST00000573716 USP37Q86T82 979 aa13.31□□□□□ -0.28
PRPF8-208ENST00000573716 TMEM130Q8N3G9 435 aa13.31□□□□□ -0.28
PRPF8-208ENST00000573716 KIFAP3Q92845 792 aa13.31□□□□□ -0.28
PRPF8-208ENST00000573716 HHIPQ96QV1 700 aa13.31□□□□□ -0.28
PRPF8-208ENST00000573716 TMEM209Q96SK2 561 aa13.31□□□□□ -0.28
PRPF8-208ENST00000573716 ACO2Q99798 780 aaKnown RBP13.31□□□□□ -0.28
PRPF8-208ENST00000573716 POLR3CQ9BUI4 534 aaPredicted RBP13.31□□□□□ -0.28
PRPF8-208ENST00000573716 TARS2Q9BW92 718 aaKnown RBP13.31□□□□□ -0.28
PRPF8-208ENST00000573716 LRRC3Q9BY71 257 aa13.31□□□□□ -0.28
PRPF8-208ENST00000573716 SMG9Q9H0W8 520 aaKnown RBP13.31□□□□□ -0.28
PRPF8-208ENST00000573716 DNAJC25Q9H1X3 360 aa13.31□□□□□ -0.28
PRPF8-208ENST00000573716 PCDHGA5Q9Y5G8 931 aa13.31□□□□□ -0.28
PRPF8-208ENST00000573716 ANKRD11Q6UB99 2663 aaPredicted RBP13.31□□□□□ -0.28
PRPF8-208ENST00000573716 VNN2O95498 520 aa13.3□□□□□ -0.28
PRPF8-208ENST00000573716 PRAMEF12O95522 483 aa13.3□□□□□ -0.28
PRPF8-208ENST00000573716 KCNE1P15382 129 aa13.3□□□□□ -0.28
PRPF8-208ENST00000573716 GABRR2P28476 465 aa13.3□□□□□ -0.28
PRPF8-208ENST00000573716 CDR1P51861 262 aa13.3□□□□□ -0.28
PRPF8-208ENST00000573716 PEX3P56589 373 aa13.3□□□□□ -0.28
PRPF8-208ENST00000573716 CYP4F8P98187 520 aa13.3□□□□□ -0.28
PRPF8-208ENST00000573716 GRSF1Q12849 480 aaKnown RBP eCLIP13.3□□□□□ -0.28
PRPF8-208ENST00000573716 ELF2Q15723 593 aa13.3□□□□□ -0.28
PRPF8-208ENST00000573716 SEZ6Q53EL9 994 aa13.3□□□□□ -0.28
PRPF8-208ENST00000573716 CENPQQ7L2Z9 268 aaPredicted RBP13.3□□□□□ -0.28
PRPF8-208ENST00000573716 DIS3L2Q8IYB7 885 aaKnown RBP13.3□□□□□ -0.28
PRPF8-208ENST00000573716 BPIFB1Q8TDL5 484 aa13.3□□□□□ -0.28
PRPF8-208ENST00000573716 MRPL4Q9BYD3 311 aaKnown RBP13.3□□□□□ -0.28
PRPF8-208ENST00000573716 BHMT2Q9H2M3 363 aa13.3□□□□□ -0.28
PRPF8-208ENST00000573716 CRISPLD1Q9H336 500 aa13.3□□□□□ -0.28
PRPF8-208ENST00000573716 THG1LQ9NWX6 298 aaKnown RBP13.3□□□□□ -0.28
PRPF8-208ENST00000573716 CNTN3Q9P232 1028 aa13.3□□□□□ -0.28
PRPF8-208ENST00000573716 ANKFY1Q9P2R3 1169 aa13.3□□□□□ -0.28
PRPF8-208ENST00000573716 TUBGCP4Q9UGJ1 667 aa13.3□□□□□ -0.28
PRPF8-208ENST00000573716 ZNF638Q14966 1978 aaKnown RBP13.3□□□□□ -0.28
PRPF8-208ENST00000573716 PHLPP2Q6ZVD8 1323 aa13.3□□□□□ -0.28
PRPF8-208ENST00000573716 DCLK1O15075 740 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 PFKFB2O60825 505 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 ATG13O75143 517 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 CTDNEP1O95476 244 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 TOP3BO95985 862 aaKnown RBP13.29□□□□□ -0.28
PRPF8-208ENST00000573716 MCF2P10911 925 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 RPA1P27694 616 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 GBP1P32455 592 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 CCT6AP40227 531 aaKnown RBP13.29□□□□□ -0.28
PRPF8-208ENST00000573716 PLCB2Q00722 1185 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 SPAG1Q07617 926 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 TRIM29Q14134 588 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 PTPAQ15257 358 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 PLK5Q496M5 336 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 SH3PXD2AQ5TCZ1 1133 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 DAB2IPQ5VWQ8 1189 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 FSTL4Q6MZW2 842 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 DSTYKQ6XUX3 929 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 GAREM2Q75VX8 874 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 DNAJB7Q7Z6W7 309 aaPredicted RBP13.29□□□□□ -0.28
PRPF8-208ENST00000573716 TTC9BQ8N6N2 239 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 ATAD1Q8NBU5 361 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 GCNAQ96QF7 691 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 MKNK1Q9BUB5 465 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 ADAM33Q9BZ11 813 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 TM6SF1Q9BZW5 370 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 GKN1Q9NS71 199 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 TPCN1Q9ULQ1 816 aa13.29□□□□□ -0.28
PRPF8-208ENST00000573716 FASNP49327 2511 aaKnown RBP13.29□□□□□ -0.28
PRPF8-208ENST00000573716 CCDC163A0A0D9SF12 145 aa13.28□□□□□ -0.28
PRPF8-208ENST00000573716 RNF40O75150 1001 aa13.28□□□□□ -0.28
PRPF8-208ENST00000573716 AKAP3O75969 853 aa13.28□□□□□ -0.28
PRPF8-208ENST00000573716 RHOBTB1O94844 696 aa13.28□□□□□ -0.28
PRPF8-208ENST00000573716 CAVIN2O95810 425 aa13.28□□□□□ -0.28
PRPF8-208ENST00000573716 MATR3P43243 847 aaKnown RBP eCLIP13.28□□□□□ -0.28
PRPF8-208ENST00000573716 NPTX2P47972 431 aa13.28□□□□□ -0.28
PRPF8-208ENST00000573716 MCM2P49736 904 aa13.28□□□□□ -0.28
PRPF8-208ENST00000573716 TAF12Q16514 161 aa13.28□□□□□ -0.28
PRPF8-208ENST00000573716 MPZL3Q6UWV2 235 aa13.28□□□□□ -0.28
PRPF8-208ENST00000573716 NECAB1Q8N987 351 aa13.28□□□□□ -0.28
PRPF8-208ENST00000573716 BEST2Q8NFU1 509 aa13.28□□□□□ -0.28
PRPF8-208ENST00000573716 ZBTB45Q96K62 511 aaPredicted RBP13.28□□□□□ -0.28
PRPF8-208ENST00000573716 ZC3H10Q96K80 434 aaKnown RBP13.28□□□□□ -0.28
PRPF8-208ENST00000573716 SEPT5Q99719 369 aaPredicted RBP13.28□□□□□ -0.28
PRPF8-208ENST00000573716 DUSP15Q9H1R2 295 aaPredicted RBP13.28□□□□□ -0.28
PRPF8-208ENST00000573716 PTPRHQ9HD43 1115 aa13.28□□□□□ -0.28
PRPF8-208ENST00000573716 KMT5AQ9NQR1 393 aa13.28□□□□□ -0.28
PRPF8-208ENST00000573716 OBP2AQ9NY56 170 aa13.28□□□□□ -0.28
PRPF8-208ENST00000573716 INVSQ9Y283 1065 aa13.28□□□□□ -0.28
PRPF8-208ENST00000573716 ZZEF1O43149 2961 aa13.27□□□□□ -0.28
PRPF8-208ENST00000573716 NUP205Q92621 2012 aa13.27□□□□□ -0.28
PRPF8-208ENST00000573716 OR6C75A6NL08 312 aa13.27□□□□□ -0.29
PRPF8-208ENST00000573716 MEFVO15553 781 aaPredicted RBP13.27□□□□□ -0.29
PRPF8-208ENST00000573716 OAZ2O95190 189 aa13.27□□□□□ -0.29
PRPF8-208ENST00000573716 FGF19O95750 216 aa13.27□□□□□ -0.29
PRPF8-208ENST00000573716 EGFP01133 1207 aa13.27□□□□□ -0.29
PRPF8-208ENST00000573716 FDPSP14324 419 aaKnown RBP13.27□□□□□ -0.29
PRPF8-208ENST00000573716 U2AF2P26368 475 aaKnown RBP eCLIP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms