RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 IPPQ9Y573 584 aa31.03■■■□□ 2.56
CTDNEP1-208ENST00000573600 ATMINO43313 823 aaPredicted RBP31.02■■■□□ 2.56
CTDNEP1-208ENST00000573600 MED7O43513 233 aa31.02■■■□□ 2.56
CTDNEP1-208ENST00000573600 DNA2P51530 1060 aa31.02■■■□□ 2.56
CTDNEP1-208ENST00000573600 LIN9Q5TKA1 542 aa31.02■■■□□ 2.56
CTDNEP1-208ENST00000573600 MON1BQ7L1V2 547 aa31.02■■■□□ 2.56
CTDNEP1-208ENST00000573600 WNT8BQ93098 351 aa31.02■■■□□ 2.56
CTDNEP1-208ENST00000573600 SDCBP2Q9H190 292 aa31.02■■■□□ 2.56
CTDNEP1-208ENST00000573600 ARGLU1Q9NWB6 273 aaPredicted RBP31.02■■■□□ 2.56
CTDNEP1-208ENST00000573600 PARP2Q9UGN5 583 aa31.02■■■□□ 2.56
CTDNEP1-208ENST00000573600 MOXD2PA6NHM9 499 aa31.01■■■□□ 2.56
CTDNEP1-208ENST00000573600 TLR3O15455 904 aaKnown RBP31.01■■■□□ 2.56
CTDNEP1-208ENST00000573600 CHRNA1P02708 482 aa31.01■■■□□ 2.56
CTDNEP1-208ENST00000573600 KCNE1P15382 129 aa31.01■■■□□ 2.56
CTDNEP1-208ENST00000573600 AKAP5P24588 427 aa31.01■■■□□ 2.56
CTDNEP1-208ENST00000573600 RAP1GAPP47736 663 aa31.01■■■□□ 2.56
CTDNEP1-208ENST00000573600 ITGA7Q13683 1181 aa31.01■■■□□ 2.56
CTDNEP1-208ENST00000573600 MTERF4Q7Z6M4 381 aaKnown RBP31.01■■■□□ 2.56
CTDNEP1-208ENST00000573600 LRRC52Q8N7C0 313 aa31.01■■■□□ 2.56
CTDNEP1-208ENST00000573600 NOA1Q8NC60 698 aaKnown RBP31.01■■■□□ 2.56
CTDNEP1-208ENST00000573600 MSANTD4Q8NCY6 345 aa31.01■■■□□ 2.56
CTDNEP1-208ENST00000573600 RPS6KC1Q96S38 1066 aa31.01■■■□□ 2.56
CTDNEP1-208ENST00000573600 TSEN34Q9BSV6 310 aaKnown RBP31.01■■■□□ 2.56
CTDNEP1-208ENST00000573600 SMYD3Q9H7B4 428 aa31.01■■■□□ 2.56
CTDNEP1-208ENST00000573600 ST3GAL5Q9UNP4 418 aa31.01■■■□□ 2.56
CTDNEP1-208ENST00000573600 CD4P01730 458 aa31.01■■■□□ 2.55
CTDNEP1-208ENST00000573600 CFHP08603 1231 aa31.01■■■□□ 2.55
CTDNEP1-208ENST00000573600 ZSCAN20P17040 1043 aaPredicted RBP31.01■■■□□ 2.55
CTDNEP1-208ENST00000573600 BRD2P25440 801 aaKnown RBP31.01■■■□□ 2.55
CTDNEP1-208ENST00000573600 ACLYP53396 1101 aa31.01■■■□□ 2.55
CTDNEP1-208ENST00000573600 C1QBPQ07021 282 aaKnown RBP31.01■■■□□ 2.55
CTDNEP1-208ENST00000573600 PTK7Q13308 1070 aa31.01■■■□□ 2.55
CTDNEP1-208ENST00000573600 PASD1Q8IV76 773 aa31.01■■■□□ 2.55
CTDNEP1-208ENST00000573600 TMEM130Q8N3G9 435 aa31.01■■■□□ 2.55
CTDNEP1-208ENST00000573600 SMG8Q8ND04 991 aaKnown RBP31.01■■■□□ 2.55
CTDNEP1-208ENST00000573600 ALG6Q9Y672 507 aa31.01■■■□□ 2.55
CTDNEP1-208ENST00000573600 GPR182O15218 404 aa31■■■□□ 2.55
CTDNEP1-208ENST00000573600 CILPO75339 1184 aa31■■■□□ 2.55
CTDNEP1-208ENST00000573600 INHAP05111 366 aa31■■■□□ 2.55
CTDNEP1-208ENST00000573600 H2AFXP16104 143 aaPredicted RBP31■■■□□ 2.55
CTDNEP1-208ENST00000573600 ATF7P17544 494 aaPredicted RBP31■■■□□ 2.55
CTDNEP1-208ENST00000573600 CDH8P55286 799 aa31■■■□□ 2.55
CTDNEP1-208ENST00000573600 PDCL2Q8N4E4 241 aa31■■■□□ 2.55
CTDNEP1-208ENST00000573600 TMEM35BQ8NCS4 154 aa31■■■□□ 2.55
CTDNEP1-208ENST00000573600 SPATA4Q8NEY3 305 aa31■■■□□ 2.55
CTDNEP1-208ENST00000573600 CXCL16Q9H2A7 254 aa31■■■□□ 2.55
CTDNEP1-208ENST00000573600 HMX1Q9NP08 348 aaPredicted RBP31■■■□□ 2.55
CTDNEP1-208ENST00000573600 ADAM22Q9P0K1 906 aa31■■■□□ 2.55
CTDNEP1-208ENST00000573600 CEP83Q9Y592 693 aa31■■■□□ 2.55
CTDNEP1-208ENST00000573600 SMIM28A0A1B0GU29 152 aa30.99■■■□□ 2.55
CTDNEP1-208ENST00000573600 MIF4GDA9UHW6 222 aaKnown RBP30.99■■■□□ 2.55
CTDNEP1-208ENST00000573600 TUBBP07437 444 aa30.99■■■□□ 2.55
CTDNEP1-208ENST00000573600 CTSHP09668 335 aa30.99■■■□□ 2.55
CTDNEP1-208ENST00000573600 RAD23BP54727 409 aa30.99■■■□□ 2.55
CTDNEP1-208ENST00000573600 MMGT1Q8N4V1 131 aa30.99■■■□□ 2.55
CTDNEP1-208ENST00000573600 ZNF296Q8WUU4 475 aaPredicted RBP30.99■■■□□ 2.55
CTDNEP1-208ENST00000573600 TUBGCP4Q9UGJ1 667 aa30.99■■■□□ 2.55
CTDNEP1-208ENST00000573600 CYP3A5P20815 502 aa30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 CDH5P33151 784 aaPredicted RBP30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 THPOP40225 353 aa30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 INCA1Q0VD86 236 aa30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 HACE1Q8IYU2 909 aa30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 RNF39Q9H2S5 420 aa30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 ANKZF1Q9H8Y5 726 aa30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 BARX2Q9UMQ3 279 aaPredicted RBP30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 MESDQ14696 234 aa30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 GLRA4Q5JXX5 417 aa30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 FBXO38Q6PIJ6 1188 aa30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 ACTRT1Q8TDG2 376 aa30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 WHAMMQ8TF30 809 aa30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 TMEM176AQ96HP8 235 aa30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 MS4A14Q96JA4 679 aa30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 GLT1D1Q96MS3 346 aa30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 PARD6BQ9BYG5 372 aa30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 EPC1Q9H2F5 836 aa30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 MRPL47Q9HD33 250 aaKnown RBP30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 NOD1Q9Y239 953 aa30.98■■■□□ 2.55
CTDNEP1-208ENST00000573600 CD19P15391 556 aa30.97■■■□□ 2.55
CTDNEP1-208ENST00000573600 RRM1P23921 792 aa30.97■■■□□ 2.55
CTDNEP1-208ENST00000573600 NFX1Q12986 1120 aaKnown RBP30.97■■■□□ 2.55
CTDNEP1-208ENST00000573600 PTPROQ16827 1216 aa30.97■■■□□ 2.55
CTDNEP1-208ENST00000573600 C9orf57Q5W0N0 161 aa30.97■■■□□ 2.55
CTDNEP1-208ENST00000573600 CCDC70Q6NSX1 233 aa30.97■■■□□ 2.55
CTDNEP1-208ENST00000573600 SLC4A11Q8NBS3 891 aa30.97■■■□□ 2.55
CTDNEP1-208ENST00000573600 TFAP2BQ92481 460 aa30.97■■■□□ 2.55
CTDNEP1-208ENST00000573600 C18orf25Q96B23 403 aaPredicted RBP30.97■■■□□ 2.55
CTDNEP1-208ENST00000573600 ZSWIM1Q9BR11 485 aa30.97■■■□□ 2.55
CTDNEP1-208ENST00000573600 C11orf70Q9BRQ4 267 aa30.97■■■□□ 2.55
CTDNEP1-208ENST00000573600 LHX5Q9H2C1 402 aa30.97■■■□□ 2.55
CTDNEP1-208ENST00000573600 CHORDC1Q9UHD1 332 aaPredicted RBP30.97■■■□□ 2.55
CTDNEP1-208ENST00000573600 SCINQ9Y6U3 715 aa30.97■■■□□ 2.55
CTDNEP1-208ENST00000573600 DDX3YO15523 660 aaKnown RBP30.96■■■□□ 2.55
CTDNEP1-208ENST00000573600 CALB1P05937 261 aa30.96■■■□□ 2.55
CTDNEP1-208ENST00000573600 GRK4P32298 578 aa30.96■■■□□ 2.55
CTDNEP1-208ENST00000573600 C2orf54Q08AI8 447 aa30.96■■■□□ 2.55
CTDNEP1-208ENST00000573600 KLK14Q9P0G3 267 aa30.96■■■□□ 2.55
CTDNEP1-208ENST00000573600 RHOXF2BP0C7M4 288 aa30.95■■■□□ 2.55
CTDNEP1-208ENST00000573600 MMP8P22894 467 aa30.95■■■□□ 2.55
CTDNEP1-208ENST00000573600 SSTR3P32745 418 aaPredicted RBP30.95■■■□□ 2.55
CTDNEP1-208ENST00000573600 PTP4A2Q12974 167 aa30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms