RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 KCNH3Q9ULD8 1083 aa9.83□□□□□ -0.84
NDE1-207ENST00000573203 POLIQ9UNA4 740 aa9.83□□□□□ -0.84
NDE1-207ENST00000573203 C2CD2Q9Y426 696 aa9.83□□□□□ -0.84
NDE1-207ENST00000573203 DOCK6Q96HP0 2047 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 GOLGA8IPA6NC78 632 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 TMEM221A6NGB7 291 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 GOLGA8JA6NMD2 632 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 M0QZQ0 153 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 M0R296 226 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 EIF3DO15371 548 aaKnown RBP eCLIP9.82□□□□□ -0.84
NDE1-207ENST00000573203 CCL16O15467 120 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 TBC1D4O60343 1298 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 PAPLNO95428 1278 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 ASGR2P07307 311 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 CMA1P23946 247 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 CASP1P29466 404 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 HOXA9P31269 272 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 ROR1Q01973 937 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 YWHAHQ04917 246 aaPredicted RBP9.82□□□□□ -0.84
NDE1-207ENST00000573203 MTMR3Q13615 1198 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 MRPL58Q14197 206 aaKnown RBP9.82□□□□□ -0.84
NDE1-207ENST00000573203 FAM26FQ5R3K3 315 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 C9orf57Q5W0N0 161 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 SLC8B1Q6J4K2 584 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 CRELD2Q6UXH1 353 aaPredicted RBP9.82□□□□□ -0.84
NDE1-207ENST00000573203 TRIM67Q6ZTA4 783 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 UNC13DQ70J99 1090 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 RTL10Q7L3V2 364 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 GET4Q7L5D6 327 aaPredicted RBP9.82□□□□□ -0.84
NDE1-207ENST00000573203 GRASPQ7Z6J2 395 aaPredicted RBP9.82□□□□□ -0.84
NDE1-207ENST00000573203 USP37Q86T82 979 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 ELOA2Q8IYF1 753 aaPredicted RBP9.82□□□□□ -0.84
NDE1-207ENST00000573203 GLIS3Q8NEA6 775 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 ENGASEQ8NFI3 743 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 ZNF461Q8TAF7 563 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 CBWD1Q9BRT8 395 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 BLZF1Q9H2G9 400 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 TSPY26PQ9H489 355 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 PCIF1Q9H4Z3 704 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 DPP3Q9NY33 737 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 RBAKQ9NYW8 714 aaPredicted RBP9.82□□□□□ -0.84
NDE1-207ENST00000573203 SERTAD1Q9UHV2 236 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 RAPGEFL1Q9UHV5 662 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 FBXL5Q9UKA1 691 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 SORCS3Q9UPU3 1222 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 HCN4Q9Y3Q4 1203 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 SCN1AP35498 2009 aa9.82□□□□□ -0.84
NDE1-207ENST00000573203 TECTAO75443 2155 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 DOCK8Q8NF50 2099 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 A0A1B0GVL5 298 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 ARHGEF37A1IGU5 675 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 SYCE3A1L190 88 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 WDR27A2RRH5 827 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 PRRG1O14668 218 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 PPEF2O14830 753 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 KIAA0391O15091 583 aaKnown RBP9.81□□□□□ -0.84
NDE1-207ENST00000573203 EXTL3O43909 919 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 N4BP1O75113 896 aaKnown RBP9.81□□□□□ -0.84
NDE1-207ENST00000573203 ABLIM3O94929 683 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 LRG1P02750 347 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 SLFN14P0C7P3 912 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 ODC1P11926 461 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 CPB1P15086 417 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 PAX3P23760 479 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 FSHRP23945 695 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 AARSP49588 968 aaKnown RBP eCLIP9.81□□□□□ -0.84
NDE1-207ENST00000573203 LILRA4P59901 499 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 TFAMQ00059 246 aaKnown RBP9.81□□□□□ -0.84
NDE1-207ENST00000573203 FAM160A1Q05DH4 1040 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 SIGLEC14Q08ET2 396 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 TSR1Q2NL82 804 aaKnown RBP9.81□□□□□ -0.84
NDE1-207ENST00000573203 PROX2Q3B8N5 592 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 TPGS2Q68CL5 300 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 HFE2Q6ZVN8 426 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 NT5DC4Q86YG4 428 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 BRSK2Q8IWQ3 736 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 UBALD2Q8IYN6 164 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 GRAMD1CQ8IYS0 662 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 ZSWIM2Q8NEG5 633 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 PBXIP1Q96AQ6 731 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 SENP8Q96LD8 212 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 MFSD14AQ96MC6 490 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 MYADMQ96S97 322 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 FUCA2Q9BTY2 467 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 OXCT2Q9BYC2 517 aaPredicted RBP9.81□□□□□ -0.84
NDE1-207ENST00000573203 NUP62CLQ9H1M0 184 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 CLSTN2Q9H4D0 955 aa9.81□□□□□ -0.84
NDE1-207ENST00000573203 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.81□□□□□ -0.84
NDE1-207ENST00000573203 TIMM13Q9Y5L4 95 aaPredicted RBP9.81□□□□□ -0.84
NDE1-207ENST00000573203 TSC2P49815 1807 aa9.8□□□□□ -0.84
NDE1-207ENST00000573203 PVALEFA0A1B0GWK0 134 aa9.8□□□□□ -0.84
NDE1-207ENST00000573203 ANO9A1A5B4 782 aa9.8□□□□□ -0.84
NDE1-207ENST00000573203 OR6C75A6NL08 312 aa9.8□□□□□ -0.84
NDE1-207ENST00000573203 PIRO00625 290 aa9.8□□□□□ -0.84
NDE1-207ENST00000573203 ACTN4O43707 911 aaKnown RBP9.8□□□□□ -0.84
NDE1-207ENST00000573203 OAZ2O95190 189 aa9.8□□□□□ -0.84
NDE1-207ENST00000573203 POU2F2P09086 479 aa9.8□□□□□ -0.84
NDE1-207ENST00000573203 ATF2P15336 505 aa9.8□□□□□ -0.84
NDE1-207ENST00000573203 PFKFB1P16118 471 aa9.8□□□□□ -0.84
NDE1-207ENST00000573203 TYMPP19971 482 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms