RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 CYP3A43Q9HB55 503 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 PLAGL2Q9UPG8 496 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 SCN9AQ15858 1988 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 TLDC2A0PJX2 215 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 RASSF10A6NK89 507 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 H7C4K7 107 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 AP1G2O75843 785 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 NFICP08651 508 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 ZNF131P52739 623 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 DLG4P78352 724 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 SLC9A9Q8IVB4 645 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 WDR35Q9P2L0 1181 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 DSEQ9UL01 958 aa10.71□□□□□ -0.69
SMG6-213ENST00000573166 NOC2LQ9Y3T9 749 aaKnown RBP10.71□□□□□ -0.69
SMG6-213ENST00000573166 LAMB2P55268 1798 aa10.71□□□□□ -0.7
SMG6-213ENST00000573166 MYO5AQ9Y4I1 1855 aaKnown RBP10.71□□□□□ -0.7
SMG6-213ENST00000573166 DNAJC25-GNG10A0A024R161 153 aa10.71□□□□□ -0.7
SMG6-213ENST00000573166 KPNA7A9QM74 516 aa10.71□□□□□ -0.7
SMG6-213ENST00000573166 PDGFRAP16234 1089 aa10.71□□□□□ -0.7
SMG6-213ENST00000573166 ACO1P21399 889 aaKnown RBP10.71□□□□□ -0.7
SMG6-213ENST00000573166 LHX1P48742 406 aa10.71□□□□□ -0.7
SMG6-213ENST00000573166 CDH8P55286 799 aa10.71□□□□□ -0.7
SMG6-213ENST00000573166 BMT2Q1RMZ1 405 aa10.71□□□□□ -0.7
SMG6-213ENST00000573166 CBWD6Q4V339 395 aa10.71□□□□□ -0.7
SMG6-213ENST00000573166 CBWD3Q5JTY5 395 aa10.71□□□□□ -0.7
SMG6-213ENST00000573166 CBWD5Q5RIA9 395 aa10.71□□□□□ -0.7
SMG6-213ENST00000573166 IFT20Q8IY31 132 aa10.71□□□□□ -0.7
SMG6-213ENST00000573166 TRIM62Q9BVG3 475 aa10.71□□□□□ -0.7
SMG6-213ENST00000573166 KCTD10Q9H3F6 313 aa10.71□□□□□ -0.7
SMG6-213ENST00000573166 CHST12Q9NRB3 414 aa10.71□□□□□ -0.7
SMG6-213ENST00000573166 GTF2IRD1Q9UHL9 959 aa10.71□□□□□ -0.7
SMG6-213ENST00000573166 A0A0B4J269 797 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 ARVCFO00192 962 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 PGRMC1O00264 195 aaKnown RBP10.7□□□□□ -0.7
SMG6-213ENST00000573166 PODXLO00592 558 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 F2P00734 622 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 GJA9P57773 515 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 NOMO2Q5JPE7 1267 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 LRRC31Q6UY01 552 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 PXYLP1Q8TE99 480 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 PAWRQ96IZ0 340 aaKnown RBP10.7□□□□□ -0.7
SMG6-213ENST00000573166 MED15Q96RN5 788 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 CDC23Q9UJX2 597 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 SMIM23A6NLE4 172 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 SGPL1O95470 568 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 ACAT1P24752 427 aaKnown RBP10.7□□□□□ -0.7
SMG6-213ENST00000573166 ADCY8P40145 1251 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 PTK7Q13308 1070 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 SNX1Q13596 522 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 ZNF677Q86XU0 584 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 BBS5Q8N3I7 341 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 C1orf131Q8NDD1 294 aaKnown RBP10.7□□□□□ -0.7
SMG6-213ENST00000573166 SLITRK1Q96PX8 696 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 PLEKHA5Q9HAU0 1116 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 TRPC7Q9HCX4 862 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 DDX43Q9NXZ2 648 aaKnown RBP10.7□□□□□ -0.7
SMG6-213ENST00000573166 IP6K2Q9UHH9 426 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 PRDM4Q9UKN5 801 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 KIAA1257Q9ULG3 409 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 ANKRD31Q8N7Z5 1873 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 APOEP02649 317 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 VDRP11473 427 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 APBA1Q02410 837 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 NFE2Q16621 373 aaPredicted RBP10.7□□□□□ -0.7
SMG6-213ENST00000573166 MORN1Q5T089 497 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 OTOP2Q7RTS6 562 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 MICALL1Q8N3F8 863 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 RNF10Q8N5U6 811 aaKnown RBP10.7□□□□□ -0.7
SMG6-213ENST00000573166 DBF4BQ8NFT6 615 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 GRK7Q8WTQ7 553 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 TSNARE1Q96NA8 513 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 RAB17Q9H0T7 212 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 UMODL1Q5DID0 1318 aa10.7□□□□□ -0.7
SMG6-213ENST00000573166 MIF4GDA9UHW6 222 aaKnown RBP10.69□□□□□ -0.7
SMG6-213ENST00000573166 MCF2LO15068 1137 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 CREB3O43889 395 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 GRM5P41594 1212 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 PTPN11Q06124 597 aaPredicted RBP10.69□□□□□ -0.7
SMG6-213ENST00000573166 SLC24A5Q71RS6 500 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 C7orf61Q8IZ16 206 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 RNF25Q96BH1 459 aaPredicted RBP10.69□□□□□ -0.7
SMG6-213ENST00000573166 SENP8Q96LD8 212 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 EHD2Q9NZN4 543 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 NAGPAQ9UK23 515 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 IPPQ9Y573 584 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 PABPN1LA6NDY0 278 aaKnown RBP10.69□□□□□ -0.7
SMG6-213ENST00000573166 ACADSBP45954 432 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 NDST1P52848 882 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 PKN2Q16513 984 aaKnown RBP10.69□□□□□ -0.7
SMG6-213ENST00000573166 FIGNQ5HY92 759 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 OR5B17Q8NGF7 314 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 TMEM176AQ96HP8 235 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 SCLYQ96I15 445 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 FAM84AQ96KN4 292 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 HINFPQ9BQA5 517 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 SYT15Q9BQS2 421 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 PTPN22Q9Y2R2 807 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 RREB1Q92766 1687 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 F8VZ95 297 aa10.69□□□□□ -0.7
SMG6-213ENST00000573166 SGK1O00141 431 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms