RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 PRPF40AO75400 957 aaKnown RBP22.28■■□□□ 1.16
CHMP6-204ENST00000572778 NR3C1P04150 777 aa22.28■■□□□ 1.16
CHMP6-204ENST00000572778 HNRNPA1P09651 372 aaKnown RBP eCLIP22.28■■□□□ 1.16
CHMP6-204ENST00000572778 TPGS2Q68CL5 300 aa22.28■■□□□ 1.16
CHMP6-204ENST00000572778 SLC9A9Q8IVB4 645 aa22.28■■□□□ 1.16
CHMP6-204ENST00000572778 SMYD4Q8IYR2 804 aaPredicted RBP22.28■■□□□ 1.16
CHMP6-204ENST00000572778 LRRC52Q8N7C0 313 aa22.28■■□□□ 1.16
CHMP6-204ENST00000572778 MFSD14AQ96MC6 490 aa22.28■■□□□ 1.16
CHMP6-204ENST00000572778 CGRRF1Q99675 332 aa22.28■■□□□ 1.16
CHMP6-204ENST00000572778 CYP4F11Q9HBI6 524 aa22.28■■□□□ 1.16
CHMP6-204ENST00000572778 WDR6Q9NNW5 1121 aaKnown RBP22.28■■□□□ 1.16
CHMP6-204ENST00000572778 SIX4Q9UIU6 781 aa22.28■■□□□ 1.16
CHMP6-204ENST00000572778 PCDHA5Q9Y5H7 936 aa22.28■■□□□ 1.16
CHMP6-204ENST00000572778 OR6C75A6NL08 312 aa22.27■■□□□ 1.16
CHMP6-204ENST00000572778 CYP11A1P05108 521 aa22.27■■□□□ 1.16
CHMP6-204ENST00000572778 OR4Q2P0C623 313 aa22.27■■□□□ 1.16
CHMP6-204ENST00000572778 ATF2P15336 505 aa22.27■■□□□ 1.16
CHMP6-204ENST00000572778 HOXA9P31269 272 aa22.27■■□□□ 1.16
CHMP6-204ENST00000572778 WSCD1Q658N2 575 aa22.27■■□□□ 1.16
CHMP6-204ENST00000572778 TDRD5Q8NAT2 981 aaKnown RBP22.27■■□□□ 1.16
CHMP6-204ENST00000572778 CXorf38Q8TB03 319 aa22.27■■□□□ 1.16
CHMP6-204ENST00000572778 GSDMAQ96QA5 445 aa22.27■■□□□ 1.16
CHMP6-204ENST00000572778 EPHX3Q9H6B9 360 aa22.27■■□□□ 1.16
CHMP6-204ENST00000572778 TRAF3IP3Q9Y228 551 aa22.27■■□□□ 1.16
CHMP6-204ENST00000572778 CUL9Q8IWT3 2517 aa22.27■■□□□ 1.16
CHMP6-204ENST00000572778 CLUHO75153 1309 aa22.27■■□□□ 1.16
CHMP6-204ENST00000572778 XYLBO75191 536 aa22.26■■□□□ 1.15
CHMP6-204ENST00000572778 PAPLNO95428 1278 aa22.26■■□□□ 1.15
CHMP6-204ENST00000572778 SEC24AO95486 1093 aa22.26■■□□□ 1.15
CHMP6-204ENST00000572778 CASP4P49662 377 aa22.26■■□□□ 1.15
CHMP6-204ENST00000572778 ADCY1Q08828 1119 aa22.26■■□□□ 1.15
CHMP6-204ENST00000572778 CEP135Q66GS9 1140 aa22.26■■□□□ 1.15
CHMP6-204ENST00000572778 RNF19BQ6ZMZ0 732 aa22.26■■□□□ 1.15
CHMP6-204ENST00000572778 RTL10Q7L3V2 364 aa22.26■■□□□ 1.15
CHMP6-204ENST00000572778 TRAPPC11Q7Z392 1133 aa22.26■■□□□ 1.15
CHMP6-204ENST00000572778 THEM5Q8N1Q8 247 aa22.26■■□□□ 1.15
CHMP6-204ENST00000572778 ACSF2Q96CM8 615 aaPredicted RBP22.26■■□□□ 1.15
CHMP6-204ENST00000572778 AFF4Q9UHB7 1163 aaKnown RBP22.26■■□□□ 1.15
CHMP6-204ENST00000572778 MUTYHQ9UIF7 546 aa22.26■■□□□ 1.15
CHMP6-204ENST00000572778 USTQ9Y2C2 406 aa22.26■■□□□ 1.15
CHMP6-204ENST00000572778 ANK1P16157 1881 aa22.26■■□□□ 1.15
CHMP6-204ENST00000572778 HUS1O60921 280 aa22.25■■□□□ 1.15
CHMP6-204ENST00000572778 LRG1P02750 347 aa22.25■■□□□ 1.15
CHMP6-204ENST00000572778 MYO1EQ12965 1108 aa22.25■■□□□ 1.15
CHMP6-204ENST00000572778 MYBPC2Q14324 1141 aa22.25■■□□□ 1.15
CHMP6-204ENST00000572778 OTOP3Q7RTS5 596 aa22.25■■□□□ 1.15
CHMP6-204ENST00000572778 GRASPQ7Z6J2 395 aaPredicted RBP22.25■■□□□ 1.15
CHMP6-204ENST00000572778 TCEAL8Q8IYN2 117 aa22.25■■□□□ 1.15
CHMP6-204ENST00000572778 TMEM174Q8WUU8 243 aa22.25■■□□□ 1.15
CHMP6-204ENST00000572778 HPDLQ96IR7 371 aa22.25■■□□□ 1.15
CHMP6-204ENST00000572778 PGLYRP2Q96PD5 576 aa22.25■■□□□ 1.15
CHMP6-204ENST00000572778 TMEM209Q96SK2 561 aa22.25■■□□□ 1.15
CHMP6-204ENST00000572778 GZF1Q9H116 711 aaPredicted RBP22.25■■□□□ 1.15
CHMP6-204ENST00000572778 FRMD4BQ9Y2L6 1034 aa22.25■■□□□ 1.15
CHMP6-204ENST00000572778 SNX9Q9Y5X1 595 aa22.25■■□□□ 1.15
CHMP6-204ENST00000572778 MUC3AQ02505 3323 aa22.24■■□□□ 1.15
CHMP6-204ENST00000572778 PI4K2BG5E9Z4 385 aa22.24■■□□□ 1.15
CHMP6-204ENST00000572778 DCXO43602 365 aa22.24■■□□□ 1.15
CHMP6-204ENST00000572778 ALADP13716 330 aa22.24■■□□□ 1.15
CHMP6-204ENST00000572778 NR2F2P24468 414 aa22.24■■□□□ 1.15
CHMP6-204ENST00000572778 GBP2P32456 591 aaPredicted RBP22.24■■□□□ 1.15
CHMP6-204ENST00000572778 UBE2HP62256 183 aa22.24■■□□□ 1.15
CHMP6-204ENST00000572778 GPR17Q13304 367 aa22.24■■□□□ 1.15
CHMP6-204ENST00000572778 ZNF658Q5TYW1 1059 aaPredicted RBP22.24■■□□□ 1.15
CHMP6-204ENST00000572778 ISM2Q6H9L7 571 aa22.24■■□□□ 1.15
CHMP6-204ENST00000572778 ELOA2Q8IYF1 753 aaPredicted RBP22.24■■□□□ 1.15
CHMP6-204ENST00000572778 OR10T2Q8NGX3 314 aa22.24■■□□□ 1.15
CHMP6-204ENST00000572778 SPATA20Q8TB22 786 aa22.24■■□□□ 1.15
CHMP6-204ENST00000572778 PLEKHO2Q8TD55 490 aa22.24■■□□□ 1.15
CHMP6-204ENST00000572778 ZNF516Q92618 1163 aa22.24■■□□□ 1.15
CHMP6-204ENST00000572778 C5orf42Q9H799 3197 aa22.24■■□□□ 1.15
CHMP6-204ENST00000572778 PHACTR2O75167 634 aa22.23■■□□□ 1.15
CHMP6-204ENST00000572778 CST3P01034 146 aaPredicted RBP22.23■■□□□ 1.15
CHMP6-204ENST00000572778 PRCPP42785 496 aa22.23■■□□□ 1.15
CHMP6-204ENST00000572778 NTHL1P78549 312 aa22.23■■□□□ 1.15
CHMP6-204ENST00000572778 GET4Q7L5D6 327 aaPredicted RBP22.23■■□□□ 1.15
CHMP6-204ENST00000572778 PLCD3Q8N3E9 789 aa22.23■■□□□ 1.15
CHMP6-204ENST00000572778 PDCL2Q8N4E4 241 aa22.23■■□□□ 1.15
CHMP6-204ENST00000572778 PARD3BQ8TEW8 1205 aa22.23■■□□□ 1.15
CHMP6-204ENST00000572778 GDAP2Q9NXN4 497 aa22.23■■□□□ 1.15
CHMP6-204ENST00000572778 LIMD1Q9UGP4 676 aa22.23■■□□□ 1.15
CHMP6-204ENST00000572778 MAFFQ9ULX9 164 aa22.23■■□□□ 1.15
CHMP6-204ENST00000572778 L1RE1Q9UN81 338 aa22.23■■□□□ 1.15
CHMP6-204ENST00000572778 INSL5Q9Y5Q6 135 aa22.23■■□□□ 1.15
CHMP6-204ENST00000572778 LRRIQ3A6PVS8 624 aaPredicted RBP22.22■■□□□ 1.15
CHMP6-204ENST00000572778 POU2F2P09086 479 aa22.22■■□□□ 1.15
CHMP6-204ENST00000572778 FSHRP23945 695 aa22.22■■□□□ 1.15
CHMP6-204ENST00000572778 RPL13P26373 211 aaKnown RBP22.22■■□□□ 1.15
CHMP6-204ENST00000572778 ADAM9Q13443 819 aa22.22■■□□□ 1.15
CHMP6-204ENST00000572778 BIRC3Q13489 604 aa22.22■■□□□ 1.15
CHMP6-204ENST00000572778 TRPC3Q13507 836 aa22.22■■□□□ 1.15
CHMP6-204ENST00000572778 NFIL3Q16649 462 aa22.22■■□□□ 1.15
CHMP6-204ENST00000572778 ZDHHC14Q8IZN3 488 aa22.22■■□□□ 1.15
CHMP6-204ENST00000572778 RTP3Q9BQQ7 232 aa22.22■■□□□ 1.15
CHMP6-204ENST00000572778 HCFC1R1Q9NWW0 138 aa22.22■■□□□ 1.15
CHMP6-204ENST00000572778 CDR1P51861 262 aa22.21■■□□□ 1.15
CHMP6-204ENST00000572778 DUSP4Q13115 394 aa22.21■■□□□ 1.15
CHMP6-204ENST00000572778 SLC39A12Q504Y0 691 aa22.21■■□□□ 1.15
CHMP6-204ENST00000572778 TMEM86AQ8N2M4 240 aa22.21■■□□□ 1.15
CHMP6-204ENST00000572778 ATAD1Q8NBU5 361 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms