RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 NAMPTP43490 491 aa11.11□□□□□ -0.63
CHMP6-203ENST00000572525 MCM2P49736 904 aa11.11□□□□□ -0.63
CHMP6-203ENST00000572525 EFNA5P52803 228 aa11.11□□□□□ -0.63
CHMP6-203ENST00000572525 CACNB1Q02641 598 aaPredicted RBP11.11□□□□□ -0.63
CHMP6-203ENST00000572525 CREB5Q02930 508 aa11.11□□□□□ -0.63
CHMP6-203ENST00000572525 GRSF1Q12849 480 aaKnown RBP eCLIP11.11□□□□□ -0.63
CHMP6-203ENST00000572525 PPP2R5AQ15172 486 aa11.11□□□□□ -0.63
CHMP6-203ENST00000572525 CTXN3Q4LDR2 81 aa11.11□□□□□ -0.63
CHMP6-203ENST00000572525 SOWAHCQ53LP3 525 aaPredicted RBP11.11□□□□□ -0.63
CHMP6-203ENST00000572525 PKN3Q6P5Z2 889 aa11.11□□□□□ -0.63
CHMP6-203ENST00000572525 SYT13Q7L8C5 426 aa11.11□□□□□ -0.63
CHMP6-203ENST00000572525 BPIFB1Q8TDL5 484 aa11.11□□□□□ -0.63
CHMP6-203ENST00000572525 EXOC4Q96A65 974 aa11.11□□□□□ -0.63
CHMP6-203ENST00000572525 SLC32A1Q9H598 525 aa11.11□□□□□ -0.63
CHMP6-203ENST00000572525 THG1LQ9NWX6 298 aaKnown RBP11.11□□□□□ -0.63
CHMP6-203ENST00000572525 ANKFY1Q9P2R3 1169 aa11.11□□□□□ -0.63
CHMP6-203ENST00000572525 GPSM3Q9Y4H4 160 aa11.11□□□□□ -0.63
CHMP6-203ENST00000572525 PCDH15Q96QU1 1955 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 CELSR3Q9NYQ7 3312 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 A0A1W2PRU2 124 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 I3L4J1 428 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 PODXLO00592 558 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 CCNT1O60563 726 aaKnown RBP11.1□□□□□ -0.63
CHMP6-203ENST00000572525 APBB3O95704 486 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 TOP3BO95985 862 aaKnown RBP11.1□□□□□ -0.63
CHMP6-203ENST00000572525 GJA1P17302 382 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 IGFBP6P24592 240 aaPredicted RBP11.1□□□□□ -0.63
CHMP6-203ENST00000572525 PDIA3P30101 505 aaKnown RBP11.1□□□□□ -0.63
CHMP6-203ENST00000572525 HOXC13P31276 330 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 RDXP35241 583 aaKnown RBP11.1□□□□□ -0.63
CHMP6-203ENST00000572525 GRM5P41594 1212 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 DPP6P42658 865 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 EPHB3P54753 998 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 SOX4Q06945 474 aaPredicted RBP11.1□□□□□ -0.63
CHMP6-203ENST00000572525 SSRP1Q08945 709 aaKnown RBP11.1□□□□□ -0.63
CHMP6-203ENST00000572525 LMAN2Q12907 356 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 GLRA4Q5JXX5 417 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 EEF1DP3Q658K8 133 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 FSTL4Q6MZW2 842 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 BLOC1S2Q6QNY1 142 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 CCDC26Q8TAB7 109 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 PSMG2Q969U7 264 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 ACDQ96AP0 544 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 LRRC3BQ96PB8 259 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 FAM83CQ9BQN1 747 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 DNAJC25Q9H1X3 360 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 GOLGA2P5Q9HBQ8 144 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 GDAQ9Y2T3 454 aa11.1□□□□□ -0.63
CHMP6-203ENST00000572525 MARCH6O60337 910 aa11.09□□□□□ -0.63
CHMP6-203ENST00000572525 USO1O60763 962 aaKnown RBP11.09□□□□□ -0.63
CHMP6-203ENST00000572525 OAZ2O95190 189 aa11.09□□□□□ -0.63
CHMP6-203ENST00000572525 CPB1P15086 417 aa11.09□□□□□ -0.63
CHMP6-203ENST00000572525 PXNP49023 591 aaPredicted RBP11.09□□□□□ -0.63
CHMP6-203ENST00000572525 YARSP54577 528 aaKnown RBP11.09□□□□□ -0.63
CHMP6-203ENST00000572525 ARPP19P56211 112 aa11.09□□□□□ -0.63
CHMP6-203ENST00000572525 GPR17Q13304 367 aa11.09□□□□□ -0.63
CHMP6-203ENST00000572525 HNRNPDQ14103 355 aaKnown RBP11.09□□□□□ -0.63
CHMP6-203ENST00000572525 TMEM132AQ24JP5 1023 aa11.09□□□□□ -0.63
CHMP6-203ENST00000572525 ARHGAP15Q53QZ3 475 aa11.09□□□□□ -0.63
CHMP6-203ENST00000572525 RNF19BQ6ZMZ0 732 aa11.09□□□□□ -0.63
CHMP6-203ENST00000572525 GAREM2Q75VX8 874 aa11.09□□□□□ -0.63
CHMP6-203ENST00000572525 POTEDQ86YR6 584 aa11.09□□□□□ -0.63
CHMP6-203ENST00000572525 CCDC94Q9BW85 323 aaPredicted RBP11.09□□□□□ -0.63
CHMP6-203ENST00000572525 PCDHB8Q9UN66 801 aa11.09□□□□□ -0.63
CHMP6-203ENST00000572525 PCDHA12Q9UN75 941 aa11.09□□□□□ -0.63
CHMP6-203ENST00000572525 TNFSF13BQ9Y275 285 aa11.09□□□□□ -0.63
CHMP6-203ENST00000572525 NUB1Q9Y5A7 615 aa11.09□□□□□ -0.63
CHMP6-203ENST00000572525 PHLPP2Q6ZVD8 1323 aa11.09□□□□□ -0.63
CHMP6-203ENST00000572525 GOLGA4Q13439 2230 aaKnown RBP11.08□□□□□ -0.64
CHMP6-203ENST00000572525 M0QZQ0 153 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 HYAL3O43820 417 aaPredicted RBP11.08□□□□□ -0.64
CHMP6-203ENST00000572525 RNF40O75150 1001 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 EDN1P05305 212 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 HOXD12P35452 270 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 ALDH1A3P47895 512 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 RUNX3Q13761 415 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 ZNF423Q2M1K9 1284 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 BMP2KLQ5H9B9 411 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 ATF7IP2Q5U623 682 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 CPLX2Q6PUV4 134 aaKnown RBP11.08□□□□□ -0.64
CHMP6-203ENST00000572525 CENPQQ7L2Z9 268 aaPredicted RBP11.08□□□□□ -0.64
CHMP6-203ENST00000572525 CYP2U1Q7Z449 544 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 PIP4P1Q86T03 277 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 PDZD3Q86UT5 571 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 ITIH5Q86UX2 942 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 DDX12PQ92771 950 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 CHFRQ96EP1 664 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 ZFYVE19Q96K21 471 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 TASP1Q9H6P5 420 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 KIF9Q9HAQ2 790 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 NCOA5Q9HCD5 579 aaKnown RBP11.08□□□□□ -0.64
CHMP6-203ENST00000572525 GPRC5CQ9NQ84 441 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 CNTN3Q9P232 1028 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 SCN1AP35498 2009 aa11.08□□□□□ -0.64
CHMP6-203ENST00000572525 KNTC1P50748 2209 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 OR6C75A6NL08 312 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 VNN2O95498 520 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 PRAMEF12O95522 483 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 ATP2B1P20020 1258 aa11.07□□□□□ -0.64
CHMP6-203ENST00000572525 MUTP22033 750 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms