RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 CYP4F11Q9HBI6 524 aa11.05□□□□□ -0.64
GTF3C1-213ENST00000571886 DPP7Q9UHL4 492 aa11.05□□□□□ -0.64
GTF3C1-213ENST00000571886 RAPGEFL1Q9UHV5 662 aa11.05□□□□□ -0.64
GTF3C1-213ENST00000571886 POLIQ9UNA4 740 aa11.05□□□□□ -0.64
GTF3C1-213ENST00000571886 NR2E1Q9Y466 385 aa11.05□□□□□ -0.64
GTF3C1-213ENST00000571886 CLUHO75153 1309 aa11.05□□□□□ -0.64
GTF3C1-213ENST00000571886 ARHGEF37A1IGU5 675 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 HCRTO43612 131 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 KRT19P08727 400 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 HNRNPA1P09651 372 aaKnown RBP eCLIP11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 TMEM191BP0C7N4 346 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 ALADP13716 330 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 HOXA9P31269 272 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 SNRPFP62306 86 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 ZXDAP98168 799 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 PSMD6Q15008 389 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 CYP26C1Q6V0L0 522 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 USP37Q86T82 979 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 OSTM1Q86WC4 334 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 SMYD4Q8IYR2 804 aaPredicted RBP11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 ZDHHC14Q8IZN3 488 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 HS6ST3Q8IZP7 471 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 TDRD5Q8NAT2 981 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 ATAD1Q8NBU5 361 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 ITFG1Q8TB96 612 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 CACTINQ8WUQ7 758 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 RSAD2Q8WXG1 361 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 EDAQ92838 391 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 ELMO3Q96BJ8 720 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 CCDC127Q96BQ5 260 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 MFSD14AQ96MC6 490 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 KIAA1586Q9HCI6 787 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 AFF4Q9UHB7 1163 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 CIZ1Q9ULV3 898 aaPredicted RBP11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 USTQ9Y2C2 406 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 TRIOO75962 3097 aa11.04□□□□□ -0.64
GTF3C1-213ENST00000571886 GOLGA6L4A6NEF3 574 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 OR6C75A6NL08 312 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 PRRG1O14668 218 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 EXOC3O60645 756 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 GPR37L1O60883 481 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 SOAT2O75908 522 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 DLATP10515 647 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 ODC1P11926 461 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 CPB1P15086 417 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 GBP2P32456 591 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 ELF1P32519 619 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 DLG4P78352 724 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 RBP5P82980 135 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 FAM160A1Q05DH4 1040 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 BFSP1Q12934 665 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 DUSP4Q13115 394 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 GPR17Q13304 367 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 KCNB1Q14721 858 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 PTPN21Q16825 1174 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 CCDC142Q17RM4 750 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 SLC5A9Q2M3M2 681 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 TPGS2Q68CL5 300 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 ELMSAN1Q6PJG2 1045 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 GET4Q7L5D6 327 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 HS2ST1Q7LGA3 356 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 TRAPPC11Q7Z392 1133 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 TCEAL8Q8IYN2 117 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 PDCL2Q8N4E4 241 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 ANKRD36BP1Q96IX9 119 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 CGRRF1Q99675 332 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 RPP25Q9BUL9 199 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 TMLHEQ9NVH6 421 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 CEP72Q9P209 647 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 ITGA11Q9UKX5 1188 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 L1RE1Q9UN81 338 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 SLC27A5Q9Y2P5 690 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 PCDHA5Q9Y5H7 936 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 INSL5Q9Y5Q6 135 aa11.03□□□□□ -0.64
GTF3C1-213ENST00000571886 MTMR11A4FU01 709 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 LRRIQ3A6PVS8 624 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 PDXKO00764 312 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 NR3C1P04150 777 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 RHOP08100 348 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 TNNI1P19237 187 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 FSHRP23945 695 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 ACAT1P24752 427 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 CCR2P41597 374 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 TWF1Q12792 350 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 MYBPC2Q14324 1141 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 SURF1Q15526 300 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 DUOXA2Q1HG44 320 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 SOWAHAQ2M3V2 549 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 SV2CQ496J9 727 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 TMEM31Q5JXX7 168 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 C1orf220Q5T0J3 134 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 ISM2Q6H9L7 571 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 CENPPQ6IPU0 288 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 OTOP3Q7RTS5 596 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 WDR49Q8IV35 697 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 SLC9A9Q8IVB4 645 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 PLCD3Q8N3E9 789 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 LRRC52Q8N7C0 313 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 PARD3BQ8TEW8 1205 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms