RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 USP38Q8NB14 1042 aa20.71■□□□□ 0.91
RPAIN-210ENST00000571613 TMEM35BQ8NCS4 154 aa20.71■□□□□ 0.91
RPAIN-210ENST00000571613 CYFIP2Q96F07 1278 aa20.71■□□□□ 0.91
RPAIN-210ENST00000571613 CAPZA3Q96KX2 299 aa20.71■□□□□ 0.91
RPAIN-210ENST00000571613 RPS6KC1Q96S38 1066 aa20.71■□□□□ 0.91
RPAIN-210ENST00000571613 DNAI2Q9GZS0 605 aa20.71■□□□□ 0.91
RPAIN-210ENST00000571613 KIAA1257Q9ULG3 409 aa20.71■□□□□ 0.91
RPAIN-210ENST00000571613 POLIQ9UNA4 740 aa20.71■□□□□ 0.91
RPAIN-210ENST00000571613 STXBP5LQ9Y2K9 1186 aa20.71■□□□□ 0.91
RPAIN-210ENST00000571613 GRIN2DO15399 1336 aa20.71■□□□□ 0.91
RPAIN-210ENST00000571613 THSD7BQ9C0I4 1608 aa20.71■□□□□ 0.91
RPAIN-210ENST00000571613 MIF4GDA9UHW6 222 aaKnown RBP20.7■□□□□ 0.91
RPAIN-210ENST00000571613 CHRNA1P02708 482 aa20.7■□□□□ 0.91
RPAIN-210ENST00000571613 THPOP40225 353 aa20.7■□□□□ 0.91
RPAIN-210ENST00000571613 CLUL1Q15846 466 aa20.7■□□□□ 0.91
RPAIN-210ENST00000571613 NAA35Q5VZE5 725 aa20.7■□□□□ 0.91
RPAIN-210ENST00000571613 SCARA3Q6AZY7 606 aa20.7■□□□□ 0.91
RPAIN-210ENST00000571613 CCDC70Q6NSX1 233 aa20.7■□□□□ 0.91
RPAIN-210ENST00000571613 MTERF4Q7Z6M4 381 aaKnown RBP20.7■□□□□ 0.91
RPAIN-210ENST00000571613 ZNF564Q8TBZ8 553 aaPredicted RBP20.7■□□□□ 0.91
RPAIN-210ENST00000571613 NUP85Q9BW27 656 aa20.7■□□□□ 0.91
RPAIN-210ENST00000571613 MRPL47Q9HD33 250 aaKnown RBP20.7■□□□□ 0.91
RPAIN-210ENST00000571613 ARGLU1Q9NWB6 273 aaPredicted RBP20.7■□□□□ 0.91
RPAIN-210ENST00000571613 LCMT1Q9UIC8 334 aa20.7■□□□□ 0.91
RPAIN-210ENST00000571613 BARX2Q9UMQ3 279 aaPredicted RBP20.7■□□□□ 0.91
RPAIN-210ENST00000571613 HES2Q9Y543 173 aa20.7■□□□□ 0.91
RPAIN-210ENST00000571613 INCA1Q0VD86 236 aa20.7■□□□□ 0.9
RPAIN-210ENST00000571613 NAA30Q147X3 362 aaPredicted RBP20.7■□□□□ 0.9
RPAIN-210ENST00000571613 FAM26DQ5JW98 314 aa20.7■□□□□ 0.9
RPAIN-210ENST00000571613 COG1Q8WTW3 980 aa20.7■□□□□ 0.9
RPAIN-210ENST00000571613 HES6Q96HZ4 224 aa20.7■□□□□ 0.9
RPAIN-210ENST00000571613 ZNF560Q96MR9 790 aa20.7■□□□□ 0.9
RPAIN-210ENST00000571613 ZMAT2Q96NC0 199 aaKnown RBP20.7■□□□□ 0.9
RPAIN-210ENST00000571613 MMS19Q96T76 1030 aa20.7■□□□□ 0.9
RPAIN-210ENST00000571613 APOL6Q9BWW8 343 aa20.7■□□□□ 0.9
RPAIN-210ENST00000571613 LHX5Q9H2C1 402 aa20.7■□□□□ 0.9
RPAIN-210ENST00000571613 COG5Q9UP83 839 aa20.7■□□□□ 0.9
RPAIN-210ENST00000571613 SCINQ9Y6U3 715 aa20.7■□□□□ 0.9
RPAIN-210ENST00000571613 SMIM28A0A1B0GU29 152 aa20.69■□□□□ 0.9
RPAIN-210ENST00000571613 ZNF185O15231 689 aa20.69■□□□□ 0.9
RPAIN-210ENST00000571613 CILPO75339 1184 aa20.69■□□□□ 0.9
RPAIN-210ENST00000571613 CALB1P05937 261 aa20.69■□□□□ 0.9
RPAIN-210ENST00000571613 AKAP5P24588 427 aa20.69■□□□□ 0.9
RPAIN-210ENST00000571613 CDH5P33151 784 aaPredicted RBP20.69■□□□□ 0.9
RPAIN-210ENST00000571613 RAB27AP51159 221 aa20.69■□□□□ 0.9
RPAIN-210ENST00000571613 NFX1Q12986 1120 aaKnown RBP20.69■□□□□ 0.9
RPAIN-210ENST00000571613 MON1BQ7L1V2 547 aa20.69■□□□□ 0.9
RPAIN-210ENST00000571613 SMG8Q8ND04 991 aaKnown RBP20.69■□□□□ 0.9
RPAIN-210ENST00000571613 CPA5Q8WXQ8 436 aa20.69■□□□□ 0.9
RPAIN-210ENST00000571613 TMEM176AQ96HP8 235 aa20.69■□□□□ 0.9
RPAIN-210ENST00000571613 ADAM22Q9P0K1 906 aa20.69■□□□□ 0.9
RPAIN-210ENST00000571613 KCNK3O14649 394 aa20.68■□□□□ 0.9
RPAIN-210ENST00000571613 CTSHP09668 335 aa20.68■□□□□ 0.9
RPAIN-210ENST00000571613 STILQ15468 1287 aa20.68■□□□□ 0.9
RPAIN-210ENST00000571613 ZNF394Q53GI3 561 aa20.68■□□□□ 0.9
RPAIN-210ENST00000571613 C9orf57Q5W0N0 161 aa20.68■□□□□ 0.9
RPAIN-210ENST00000571613 LHX8Q68G74 356 aa20.68■□□□□ 0.9
RPAIN-210ENST00000571613 TRAIPQ9BWF2 469 aa20.68■□□□□ 0.9
RPAIN-210ENST00000571613 FAM105AQ9NUU6 356 aa20.68■□□□□ 0.9
RPAIN-210ENST00000571613 SLC38A7Q9NVC3 462 aa20.68■□□□□ 0.9
RPAIN-210ENST00000571613 ALG6Q9Y672 507 aa20.68■□□□□ 0.9
RPAIN-210ENST00000571613 VDRP11473 427 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 SKIP12755 728 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 CXCR5P32302 372 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 GUCY2FP51841 1108 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 RAD23BP54727 409 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 UBL4BQ8N7F7 174 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 MSANTD4Q8NCY6 345 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 BEGAINQ9BUH8 593 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 SMYD3Q9H7B4 428 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 PIRO00625 290 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 CALCAP01258 141 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 ITGA4P13612 1032 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 CD19P15391 556 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 MMP8P22894 467 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 MCM3P25205 808 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 BRD2P25440 801 aaKnown RBP20.67■□□□□ 0.9
RPAIN-210ENST00000571613 PAK2Q13177 524 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 FBXO47Q5MNV8 452 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 SPATA4Q8NEY3 305 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 ACTRT1Q8TDG2 376 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 WNT8BQ93098 351 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 PSMB7Q99436 277 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 NT5C1AQ9BXI3 368 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 SDCBP2Q9H190 292 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 WNT8AQ9H1J5 351 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 ERVK-5Q9HDB9 667 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 STRIP2Q9ULQ0 834 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 PACSIN2Q9UNF0 486 aaPredicted RBP20.67■□□□□ 0.9
RPAIN-210ENST00000571613 GIT1Q9Y2X7 761 aa20.67■□□□□ 0.9
RPAIN-210ENST00000571613 A0A0U1RQG5 324 aaPredicted RBP20.66■□□□□ 0.9
RPAIN-210ENST00000571613 KBTBD13C9JR72 458 aa20.66■□□□□ 0.9
RPAIN-210ENST00000571613 SLC1A1P43005 524 aa20.66■□□□□ 0.9
RPAIN-210ENST00000571613 RAP1GAPP47736 663 aa20.66■□□□□ 0.9
RPAIN-210ENST00000571613 CDH8P55286 799 aa20.66■□□□□ 0.9
RPAIN-210ENST00000571613 FAM43BQ6ZT52 329 aaPredicted RBP20.66■□□□□ 0.9
RPAIN-210ENST00000571613 UNC93AQ86WB7 457 aa20.66■□□□□ 0.9
RPAIN-210ENST00000571613 PASD1Q8IV76 773 aa20.66■□□□□ 0.9
RPAIN-210ENST00000571613 MMGT1Q8N4V1 131 aa20.66■□□□□ 0.9
RPAIN-210ENST00000571613 SLC43A3Q8NBI5 491 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms