RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 CCDC172P0C7W6 258 aa16.49■□□□□ 0.23
HERPUD1-219ENST00000570273 IGFBP6P24592 240 aaPredicted RBP16.49■□□□□ 0.23
HERPUD1-219ENST00000570273 MAGEA10P43363 369 aaPredicted RBP16.49■□□□□ 0.23
HERPUD1-219ENST00000570273 SLC11A1P49279 550 aa16.49■□□□□ 0.23
HERPUD1-219ENST00000570273 CDH8P55286 799 aa16.49■□□□□ 0.23
HERPUD1-219ENST00000570273 KLHL30Q0D2K2 578 aa16.49■□□□□ 0.23
HERPUD1-219ENST00000570273 WDR59Q6PJI9 974 aa16.49■□□□□ 0.23
HERPUD1-219ENST00000570273 TMEM270Q6UE05 265 aa16.49■□□□□ 0.23
HERPUD1-219ENST00000570273 FAM71AQ8IYT1 594 aa16.49■□□□□ 0.23
HERPUD1-219ENST00000570273 CMTR2Q8IYT2 770 aaKnown RBP16.49■□□□□ 0.23
HERPUD1-219ENST00000570273 RBBP8NLQ8NC74 664 aaPredicted RBP16.49■□□□□ 0.23
HERPUD1-219ENST00000570273 ZNF689Q96CS4 500 aaPredicted RBP16.49■□□□□ 0.23
HERPUD1-219ENST00000570273 SENP8Q96LD8 212 aa16.49■□□□□ 0.23
HERPUD1-219ENST00000570273 SLC9A7Q96T83 725 aa16.49■□□□□ 0.23
HERPUD1-219ENST00000570273 TMEM175Q9BSA9 504 aa16.49■□□□□ 0.23
HERPUD1-219ENST00000570273 KCNF1Q9H3M0 494 aa16.49■□□□□ 0.23
HERPUD1-219ENST00000570273 RC3H2Q9HBD1 1191 aaKnown RBP16.49■□□□□ 0.23
HERPUD1-219ENST00000570273 COL4A6Q14031 1691 aa16.49■□□□□ 0.23
HERPUD1-219ENST00000570273 F8W810 466 aa16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 TMEM189-UBE2V1I3L0A0 370 aa16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 CYB561D2O14569 222 aa16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 CYP26A1O43174 497 aa16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 SERPING1P05155 500 aa16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 SKILP12757 684 aa16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 FECHP22830 423 aa16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 PAX3P23760 479 aa16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 BRCC3P46736 316 aa16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 AARSP49588 968 aaKnown RBP eCLIP16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 CCZ1BP86790 482 aa16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 CCZ1P86791 482 aaPredicted RBP16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 BTG3Q14201 252 aaPredicted RBP16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 SPOUT1Q5T280 376 aaKnown RBP16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 CYP26C1Q6V0L0 522 aa16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 TMEM139Q8IV31 216 aa16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 TTC39CQ8N584 583 aa16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 TOP6BLQ8N6T0 577 aa16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 APPL2Q8NEU8 664 aa16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 ZBED2Q9BTP6 218 aa16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 L1RE1Q9UN81 338 aa16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 SCN1AP35498 2009 aa16.48■□□□□ 0.23
HERPUD1-219ENST00000570273 H0YGN5 161 aa16.47■□□□□ 0.23
HERPUD1-219ENST00000570273 I3L4J1 428 aa16.47■□□□□ 0.23
HERPUD1-219ENST00000570273 NRP1O14786 923 aa16.47■□□□□ 0.23
HERPUD1-219ENST00000570273 GJB5O95377 273 aa16.47■□□□□ 0.23
HERPUD1-219ENST00000570273 ITGB1P05556 798 aa16.47■□□□□ 0.23
HERPUD1-219ENST00000570273 ODC1P11926 461 aa16.47■□□□□ 0.23
HERPUD1-219ENST00000570273 ATP2A2P16615 1042 aaKnown RBP16.47■□□□□ 0.23
HERPUD1-219ENST00000570273 SOWAHAQ2M3V2 549 aa16.47■□□□□ 0.23
HERPUD1-219ENST00000570273 TIGD5Q53EQ6 642 aa16.47■□□□□ 0.23
HERPUD1-219ENST00000570273 CD300LGQ6UXG3 332 aa16.47■□□□□ 0.23
HERPUD1-219ENST00000570273 IRF2BP2Q7Z5L9 587 aa16.47■□□□□ 0.23
HERPUD1-219ENST00000570273 TMTC1Q8IUR5 882 aa16.47■□□□□ 0.23
HERPUD1-219ENST00000570273 ADGRF2Q8IZF7 708 aa16.47■□□□□ 0.23
HERPUD1-219ENST00000570273 MRPL45Q9BRJ2 306 aaKnown RBP16.47■□□□□ 0.23
HERPUD1-219ENST00000570273 COLEC11Q9BWP8 271 aa16.47■□□□□ 0.23
HERPUD1-219ENST00000570273 FAM124BQ9H5Z6 455 aaPredicted RBP16.47■□□□□ 0.23
HERPUD1-219ENST00000570273 BARX2Q9UMQ3 279 aaPredicted RBP16.47■□□□□ 0.23
HERPUD1-219ENST00000570273 FAN1Q9Y2M0 1017 aa16.47■□□□□ 0.23
HERPUD1-219ENST00000570273 FNDC1Q4ZHG4 1894 aaPredicted RBP16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 SOWAHDA6NJG2 315 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 CILPO75339 1184 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 TACC1O75410 805 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 TADA2AO75478 443 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 ALDH2P05091 517 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 GALTP07902 379 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 PBX3P40426 434 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 PRKCIP41743 596 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 PDE6CP51160 858 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 ZNF132P52740 706 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 BCAR1P56945 870 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 CDK17Q00537 523 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 INCA1Q0VD86 236 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 ZNF394Q53GI3 561 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 PRPF38BQ5VTL8 546 aaKnown RBP16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 HGSNATQ68CP4 663 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 SMYD5Q6GMV2 418 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 HERC6Q8IVU3 1022 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 PDCL2Q8N4E4 241 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 PHOSPHO2Q8TCD6 241 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 CHP1Q99653 195 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 SNX25Q9H3E2 840 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 DEF6Q9H4E7 631 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 CWH43Q9H720 699 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 MARCH5Q9NX47 278 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 ARHGAP20Q9P2F6 1191 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 HMGXB4Q9UGU5 601 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 CNTN6Q9UQ52 1028 aa16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 MRPL42Q9Y6G3 142 aaKnown RBP16.46■□□□□ 0.23
HERPUD1-219ENST00000570273 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.46■□□□□ 0.232e-7■□□□□ 10.4
HERPUD1-219ENST00000570273 ARHGEF37A1IGU5 675 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 PLEKP08567 350 aaPredicted RBP16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 WARSP23381 471 aaKnown RBP16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 CLCN1P35523 988 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 EIF4A3P38919 411 aaKnown RBP16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 NDST1P52848 882 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 BPIFB4P59827 614 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 PTK2Q05397 1052 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 ORC1Q13415 861 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 HS1BP3Q53T59 392 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 WSCD1Q658N2 575 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms