RNA–Protein interactions for RNA: ENST00000570195.5

CMC2-223, Transcript of C-X9-C motif containing 2, human

TSL 3 BASIC

Gene CMC2, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-223	ENST00000570195	NEK4	P51957	841 aa		11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	EPHB3	P54753	998 aa		11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	RAD51AP2	Q09MP3	1159 aa		11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	STRN3	Q13033	797 aa		11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	PLD1	Q13393	1074 aa		11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	GNL2	Q13823	731 aa	Known RBP	11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	SF3A2	Q15428	464 aa	Known RBP	11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	CCDC6	Q16204	474 aa		11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	AASDH	Q4L235	1098 aa	Predicted RBP	11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	DGKK	Q5KSL6	1271 aa		11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	IL31	Q6EBC2	164 aa		11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	RINT1	Q6NUQ1	792 aa		11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	C1orf228	Q6PIY5	440 aa		11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	DSTYK	Q6XUX3	929 aa		11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	KCNK18	Q7Z418	384 aa		11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	USP37	Q86T82	979 aa		11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	TTC9B	Q8N6N2	239 aa		11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	DRC1	Q96MC2	740 aa		11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	MKNK1	Q9BUB5	465 aa		11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	FOXP1	Q9H334	677 aa	Predicted RBP	11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	ATXN3L	Q9H3M9	355 aa		11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	RALGAPA1	Q6GYQ0	2036 aa		11.99	□□□□□ -0.49
CMC2-223	ENST00000570195	USP24	Q9UPU5	2620 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	TOM1L1	O75674	476 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	GABRR2	P28476	465 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	LRPAP1	P30533	357 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	MATR3	P43243	847 aa	Known RBP eCLIP	11.98	□□□□□ -0.49	7e-7	■■■■□ 21.9
CMC2-223	ENST00000570195	PXN	P49023	591 aa	Predicted RBP	11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	CDR1	P51861	262 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	TNK2	Q07912	1038 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	GPR17	Q13304	367 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	ZRSR1	Q15695	479 aa	Known RBP	11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	ARHGAP29	Q52LW3	1261 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	GPR158	Q5T848	1215 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	CENPP	Q6IPU0	288 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	C1orf186	Q6ZWK4	172 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	GAREM2	Q75VX8	874 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	HAUS6	Q7Z4H7	955 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	WDR5B	Q86VZ2	330 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	RALGPS2	Q86X27	583 aa	Predicted RBP	11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	CCDC83	Q8IWF9	413 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	IGSF22	Q8N9C0	903 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	ATAD1	Q8NBU5	361 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	KIF12	Q96FN5	646 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	TMEM209	Q96SK2	561 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	HAPLN2	Q9GZV7	340 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	ARRDC1-AS1	Q9H2J1	176 aa		11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	NOL7	Q9UMY1	257 aa	Known RBP	11.98	□□□□□ -0.49
CMC2-223	ENST00000570195	PDCD11	Q14690	1871 aa	Known RBP	11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	MTMR11	A4FU01	709 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	OR6C75	A6NL08	312 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	PPEF2	O14830	753 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	CLDN3	O15551	220 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	EXTL3	O43909	919 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	PRAMEF12	O95522	483 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	TNFSF9	P41273	254 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	AARS	P49588	968 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	CYP4F8	P98187	520 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	MCL1	Q07820	350 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	CCIN	Q13939	588 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	PDIA5	Q14554	519 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	KRT79	Q5XKE5	535 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	PKN3	Q6P5Z2	889 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	C12orf50	Q8NA57	414 aa	Predicted RBP	11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	DDX1	Q92499	740 aa	Known RBP	11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	RAB34	Q9BZG1	259 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	SMG9	Q9H0W8	520 aa	Known RBP	11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	C17orf75	Q9HAS0	396 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	RXFP3	Q9NSD7	469 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	ANGPTL2	Q9UKU9	493 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	UBQLN1	Q9UMX0	589 aa	Known RBP	11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	STK24	Q9Y6E0	443 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	CACNA1G	O43497	2377 aa		11.97	□□□□□ -0.49
CMC2-223	ENST00000570195	TTC26	A0AVF1	554 aa		11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	LACTBL1	A8MY62	500 aa		11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	FOXD2	O60548	495 aa	Predicted RBP	11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	CLTA	P09496	248 aa		11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	MAPT	P10636	758 aa	Known RBP	11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	PLS3	P13797	630 aa		11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	TRAPPC10	P48553	1259 aa		11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	ZBTB6	Q15916	424 aa		11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	IL17A	Q16552	155 aa		11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	ARHGAP15	Q53QZ3	475 aa		11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	OVOS1	Q6IE37	1185 aa		11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	ZPBP2	Q6X784	338 aa		11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	TMEM161B	Q8NDZ6	487 aa		11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	FBXO18	Q8NFZ0	1043 aa		11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	BPIFB1	Q8TDL5	484 aa		11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	SPIRE2	Q8WWL2	714 aa		11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	PSMG2	Q969U7	264 aa		11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	BICD1	Q96G01	975 aa		11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	LPIN3	Q9BQK8	851 aa		11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	NTPCR	Q9BSD7	190 aa	Known RBP	11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	MMTAG2	Q9BU76	263 aa	Known RBP	11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	SMOC1	Q9H4F8	434 aa		11.96	□□□□□ -0.49
CMC2-223	ENST00000570195	PLEKHA5	Q9HAU0	1116 aa		11.96	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms