RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 NAV1Q8NEY1 1877 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 MROH7-TTC4A0A0A0MT08 1334 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 GOLGA6L22H0YM25 854 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 FOXN3O00409 490 aaPredicted RBP8.06□□□□□ -1.12
CNOT1-222ENST00000570139 HTRA2O43464 458 aaPredicted RBP8.06□□□□□ -1.12
CNOT1-222ENST00000570139 MBD4O95243 580 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 ZBTB7AO95365 584 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 PRLP01236 227 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 CYP21A2P08686 494 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 RPL17P18621 184 aaKnown RBP8.06□□□□□ -1.12
CNOT1-222ENST00000570139 CHRNA5P30532 468 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 WASP42768 502 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 CDK17Q00537 523 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 MECOMQ03112 1051 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 KIAA2012Q0VF49 1180 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 NFIAQ12857 509 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 TRDNQ13061 729 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 R3HDM1Q15032 1099 aaKnown RBP8.06□□□□□ -1.12
CNOT1-222ENST00000570139 SLFN12LQ6IEE8 588 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 PPP4R3AQ6IN85 833 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 CCDC129Q6ZRS4 1044 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 CEP128Q6ZU80 1094 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 MIGA2Q7L4E1 593 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 PCGF5Q86SE9 256 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 PLD6Q8N2A8 252 aaKnown RBP8.06□□□□□ -1.12
CNOT1-222ENST00000570139 FBXL16Q8N461 479 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 NETO2Q8NC67 525 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 CCT6BQ92526 530 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 HDAC10Q969S8 669 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 FOXRED1Q96CU9 486 aaPredicted RBP8.06□□□□□ -1.12
CNOT1-222ENST00000570139 INTS4Q96HW7 963 aaKnown RBP8.06□□□□□ -1.12
CNOT1-222ENST00000570139 RIPOR3Q96MK2 946 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 NEK1Q96PY6 1258 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 RIOK1Q9BRS2 568 aaKnown RBP8.06□□□□□ -1.12
CNOT1-222ENST00000570139 LRFN3Q9BTN0 628 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 CRB3Q9BUF7 120 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 RNF41Q9H4P4 317 aaPredicted RBP8.06□□□□□ -1.12
CNOT1-222ENST00000570139 ATP8A2Q9NTI2 1148 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 SWAP70Q9UH65 585 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 TMPRSS11EQ9UL52 423 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 CFAP20Q9Y6A4 193 aaKnown RBP8.06□□□□□ -1.12
CNOT1-222ENST00000570139 DGKBQ9Y6T7 804 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 FER1L6Q2WGJ9 1857 aa8.06□□□□□ -1.12
CNOT1-222ENST00000570139 DDX60LQ5H9U9 1706 aaKnown RBP8.06□□□□□ -1.12
CNOT1-222ENST00000570139 MYH2Q9UKX2 1941 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 GSC2O15499 205 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 SLC3A2P08195 630 aaKnown RBP8.05□□□□□ -1.12
CNOT1-222ENST00000570139 PFKMP08237 780 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 DPEP1P16444 411 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 RPS6KB1P23443 525 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 TACR1P25103 407 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 TDO2P48775 406 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 SLC6A3Q01959 620 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 TRIM14Q14142 442 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 SLC14A2Q15849 920 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 MFSD14BQ5SR56 506 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 STRIP1Q5VSL9 837 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 MAEAQ7L5Y9 396 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 KANSL1Q7Z3B3 1105 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 RALYLQ86SE5 291 aaKnown RBP8.05□□□□□ -1.12
CNOT1-222ENST00000570139 RBM12BQ8IXT5 1001 aaKnown RBP8.05□□□□□ -1.12
CNOT1-222ENST00000570139 ANKS4BQ8N8V4 417 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 NCOA7Q8NI08 942 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 CDK5RAP3Q96JB5 506 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 TTC14Q96N46 770 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 MRIQ9BWK5 157 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 WDR12Q9GZL7 423 aaKnown RBP8.05□□□□□ -1.12
CNOT1-222ENST00000570139 DMRT3Q9NQL9 472 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 PDRG1Q9NUG6 133 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 ARPP21Q9UBL0 812 aaPredicted RBP8.05□□□□□ -1.12
CNOT1-222ENST00000570139 PRSS50Q9UI38 385 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 PADI4Q9UM07 663 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 LIMCH1Q9UPQ0 1083 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 CDY2AQ9Y6F7 541 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 SLC4A4Q9Y6R1 1079 aa8.05□□□□□ -1.12
CNOT1-222ENST00000570139 GAKO14976 1311 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 ECM29Q5VYK3 1845 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 CFAP69A5D8W1 941 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 RHPN2P1A8MT19 583 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 E7EWF7 191 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 SLC16A6O15403 523 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 CYP26A1O43174 497 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 FRS3O43559 492 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 ECE2O60344 883 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 USP2O75604 605 aaPredicted RBP8.04□□□□□ -1.12
CNOT1-222ENST00000570139 KCNA3P22001 575 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 AOAHP28039 575 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 PRDX5P30044 214 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 PRIM2P49643 509 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 RENBPP51606 427 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 TNFAIP2Q03169 654 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 CHRNEQ04844 493 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 PPARAQ07869 468 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 TRIM25Q14258 630 aaKnown RBP8.04□□□□□ -1.12
CNOT1-222ENST00000570139 MYBPC3Q14896 1274 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 SNX17Q15036 470 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 ELF2Q15723 593 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 CCDC157Q569K6 752 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 TTLL5Q6EMB2 1281 aa8.04□□□□□ -1.12
CNOT1-222ENST00000570139 PRR23CQ6ZRP0 262 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms