RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 LIMCH1Q9UPQ0 1083 aa13.15□□□□□ -0.3
CAPN3-220ENST00000569827 LACTBL1A8MY62 500 aa13.14□□□□□ -0.31
CAPN3-220ENST00000569827 CXCL12P48061 93 aa13.14□□□□□ -0.31
CAPN3-220ENST00000569827 CYP4F8P98187 520 aa13.14□□□□□ -0.31
CAPN3-220ENST00000569827 TNK2Q07912 1038 aa13.14□□□□□ -0.31
CAPN3-220ENST00000569827 PON2Q15165 354 aa13.14□□□□□ -0.31
CAPN3-220ENST00000569827 LAIR1Q6GTX8 287 aa13.14□□□□□ -0.31
CAPN3-220ENST00000569827 DSTYKQ6XUX3 929 aa13.14□□□□□ -0.31
CAPN3-220ENST00000569827 ARID3BQ8IVW6 561 aaPredicted RBP13.14□□□□□ -0.31
CAPN3-220ENST00000569827 STKLD1Q8NE28 680 aa13.14□□□□□ -0.31
CAPN3-220ENST00000569827 BEST2Q8NFU1 509 aa13.14□□□□□ -0.31
CAPN3-220ENST00000569827 FAM212AQ96EL1 285 aa13.14□□□□□ -0.31
CAPN3-220ENST00000569827 LPIN3Q9BQK8 851 aa13.14□□□□□ -0.31
CAPN3-220ENST00000569827 MKNK1Q9BUB5 465 aa13.14□□□□□ -0.31
CAPN3-220ENST00000569827 POLR3BQ9NW08 1133 aaPredicted RBP13.14□□□□□ -0.31
CAPN3-220ENST00000569827 ZFHX4Q86UP3 3567 aa13.14□□□□□ -0.31
CAPN3-220ENST00000569827 CACNA1GO43497 2377 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 MTMR11A4FU01 709 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 PRR5-ARHGAP8B1AHC4 643 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 SPECC1L-ADORA2AF8WAN1 911 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 K7ESF4 209 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 M0QZQ0 153 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 CLDN3O15551 220 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 TOM1L1O75674 476 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 MICAL2O94851 1124 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 PRAMEF12O95522 483 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 PLS3P13797 630 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 GABRR2P28476 465 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 TRAPPC10P48553 1259 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 PXNP49023 591 aaPredicted RBP13.13□□□□□ -0.31
CAPN3-220ENST00000569827 ARHGAP8P85298 464 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 PDIA5Q14554 519 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 DHX8Q14562 1220 aaKnown RBP13.13□□□□□ -0.31
CAPN3-220ENST00000569827 ENOX2Q16206 610 aaKnown RBP13.13□□□□□ -0.31
CAPN3-220ENST00000569827 PPM1JQ5JR12 505 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 GPR158Q5T848 1215 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 PKN3Q6P5Z2 889 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 GAREM2Q75VX8 874 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.13□□□□□ -0.31
CAPN3-220ENST00000569827 USP37Q86T82 979 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 GPR161Q8N6U8 529 aaKnown RBP13.13□□□□□ -0.31
CAPN3-220ENST00000569827 LRRC15Q8TF66 581 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 RTKNQ9BST9 563 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 FAM126AQ9BYI3 521 aaPredicted RBP13.13□□□□□ -0.31
CAPN3-220ENST00000569827 RAB34Q9BZG1 259 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 ATXN3LQ9H3M9 355 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 TRPV4Q9HBA0 871 aa13.13□□□□□ -0.31
CAPN3-220ENST00000569827 RBM19Q9Y4C8 960 aaKnown RBP13.13□□□□□ -0.31
CAPN3-220ENST00000569827 PTPRDP23468 1912 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 TTC26A0AVF1 554 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 GUCY2CP25092 1073 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 U2AF2P26368 475 aaKnown RBP eCLIP13.12□□□□□ -0.31
CAPN3-220ENST00000569827 CTHP32929 405 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 EPHB3P54753 998 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 SLC12A3P55017 1021 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 PPP2R3AQ06190 1150 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 MCL1Q07820 350 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 PLD1Q13393 1074 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 MCTP1Q6DN14 999 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 OVOS1Q6IE37 1185 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 CENPPQ6IPU0 288 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 DTHD1Q6ZMT9 781 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 PRR23CQ6ZRP0 262 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 CELF5Q8N6W0 485 aaKnown RBP13.12□□□□□ -0.31
CAPN3-220ENST00000569827 OR10T2Q8NGX3 314 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 FAM200AQ8TCP9 573 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 SEPT5Q99719 369 aaPredicted RBP13.12□□□□□ -0.31
CAPN3-220ENST00000569827 LLPHQ9BRT6 129 aaKnown RBP13.12□□□□□ -0.31
CAPN3-220ENST00000569827 TRPV5Q9NQA5 729 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.12□□□□□ -0.31
CAPN3-220ENST00000569827 SEMA4GQ9NTN9 838 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 GON4LQ3T8J9 2241 aa13.12□□□□□ -0.31
CAPN3-220ENST00000569827 CEP295Q9C0D2 2601 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 MYO18AQ92614 2054 aaKnown RBP13.11□□□□□ -0.31
CAPN3-220ENST00000569827 CHD6Q8TD26 2715 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 VWA3AA6NCI4 1184 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 TISP43B9A030 160 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 CHADO15335 359 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 OAZ2O95190 189 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 RETP07949 1114 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 NFICP08651 508 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 CLTAP09496 248 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 PLA2G4BP0C869 781 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 ATF6P18850 670 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 LRPAP1P30533 357 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 PI4KAP42356 2102 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 ALDH1A3P47895 512 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 AARSP49588 968 aaKnown RBP eCLIP13.11□□□□□ -0.31
CAPN3-220ENST00000569827 LIG4P49917 911 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 NRLP54845 237 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 HMGN5P82970 282 aaKnown RBP13.11□□□□□ -0.31
CAPN3-220ENST00000569827 FCHO2Q0JRZ9 810 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 PPP2R5DQ14738 602 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 ZBTB6Q15916 424 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 JADE1Q6IE81 842 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 CEP68Q76N32 757 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 DNAJB7Q7Z6W7 309 aaPredicted RBP13.11□□□□□ -0.31
CAPN3-220ENST00000569827 SPEM1Q8N4L4 309 aa13.11□□□□□ -0.31
CAPN3-220ENST00000569827 FAM160A2Q8N612 972 aaPredicted RBP13.11□□□□□ -0.31
CAPN3-220ENST00000569827 LEMD2Q8NC56 503 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms