RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 PCDHGB2Q9Y5G2 931 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 OBSL1O75147 1896 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 TTC41PQ6P2S7 1318 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 GOLGA8CPA6NN73 597 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 ZNF213O14771 459 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 FLRT2O43155 660 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 TNFSF14O43557 240 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 ELAVL4P26378 380 aaKnown RBP7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 SMARCA1P28370 1054 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 AXLP30530 894 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 ACTN2P35609 894 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 PRKCEQ02156 737 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 SCRN1Q12765 414 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 MYO1EQ12965 1108 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 GRIK2Q13002 908 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 PSMD2Q13200 908 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 MCMDC2Q4G0Z9 681 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 C6orf132Q5T0Z8 1188 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 TPGS2Q68CL5 300 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 DHRS13Q6UX07 377 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 SLC36A4Q6YBV0 504 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 PI4K2BQ8TCG2 481 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 RHBDD1Q8TEB9 315 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 USP33Q8TEY7 942 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 RRP36Q96EU6 259 aaKnown RBP7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 DDX27Q96GQ7 796 aaKnown RBP7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 PNMA5Q96PV4 448 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 NIFKQ9BYG3 293 aaKnown RBP7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 FAM124BQ9H5Z6 455 aaPredicted RBP7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 MINDY3Q9H8M7 445 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 TM7SF3Q9NS93 570 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 TBC1D22BQ9NU19 505 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 SUSD2Q9UGT4 822 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 MAFFQ9ULX9 164 aa7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 TP53BP1Q12888 1972 aaPredicted RBP7.36□□□□□ -1.23
HERPUD1-217ENST00000569429 HIVEP1P15822 2718 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 CASTOR2A6NHX0 329 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 TMEM189-UBE2V1I3L0A0 370 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 PRAMEF12O95522 483 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 HNRNPLP14866 589 aaKnown RBP eCLIP7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 JUPP14923 745 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 GJA4P35212 333 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 HNF1BP35680 557 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 RPL6Q02878 288 aaKnown RBP7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 VAC14Q08AM6 782 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 TWF1Q12792 350 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 NUMA1Q14980 2115 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 PCBP1Q15365 356 aaKnown RBP eCLIP7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 TBC1D25Q3MII6 688 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 STXBP5Q5T5C0 1151 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 NAIF1Q69YI7 327 aaPredicted RBP7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 NOTUMQ6P988 496 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 TMEM92Q6UXU6 159 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 ZNF248Q8NDW4 579 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 OXER1Q8TDS5 423 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 CD101Q93033 1021 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 LGMNQ99538 433 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 POLR3CQ9BUI4 534 aaPredicted RBP7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 SPZ1Q9BXG8 430 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 CSRNP2Q9H175 543 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 EBF3Q9H4W6 596 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 STARD5Q9NSY2 213 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 SEC63Q9UGP8 760 aaKnown RBP7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 CIZ1Q9ULV3 898 aaPredicted RBP7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 DOCK9Q9BZ29 2069 aa7.35□□□□□ -1.23
HERPUD1-217ENST00000569429 CITO14578 2027 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 MYH10P35580 1976 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 IGLV3-22A0A075B6J6 115 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 ESYT2A0FGR8 921 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 BLACEA4D250 179 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 WDR64B1ANS9 1081 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 BRINP1O60477 761 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 FOSP01100 380 aaPredicted RBP7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 GNSP15586 552 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 AKAP5P24588 427 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 U2AF2P26368 475 aaKnown RBP eCLIP7.34□□□□□ -1.233e-8■■□□□ 11.9
HERPUD1-217ENST00000569429 TKTP29401 623 aaKnown RBP7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 MTERF2Q49AM1 385 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 TRIM68Q6AZZ1 485 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 HIST2H2BCQ6DN03 193 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 XKR5Q6UX68 686 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 ZNF589Q86UQ0 364 aaPredicted RBP7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 TTC30AQ86WT1 665 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 PLA2G4DQ86XP0 818 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 SLC41A1Q8IVJ1 513 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 TEX2Q8IWB9 1127 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 SPRYD3Q8NCJ5 442 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 TSC1Q92574 1164 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 LPIN3Q9BQK8 851 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 JPH2Q9BR39 696 aaPredicted RBP7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 KRT23Q9C075 422 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 NXF3Q9H4D5 531 aaKnown RBP7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 AFF4Q9UHB7 1163 aaKnown RBP7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 TCEAL9Q9UHQ7 104 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 SSUH2Q9Y2M2 353 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 SAMM50Q9Y512 469 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 PCDHGA1Q9Y5H4 931 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 COL4A3BPQ9Y5P4 624 aa7.34□□□□□ -1.23
HERPUD1-217ENST00000569429 PDZD2O15018 2839 aa7.33□□□□□ -1.24
HERPUD1-217ENST00000569429 ANAPC1Q9H1A4 1944 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms