RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 CHRNEQ04844 493 aa8.92□□□□□ -0.98
CCDC113-205ENST00000569374 KLRC3Q07444 240 aa8.92□□□□□ -0.98
CCDC113-205ENST00000569374 LRRC32Q14392 662 aa8.92□□□□□ -0.98
CCDC113-205ENST00000569374 SMAD2Q15796 467 aaKnown RBP8.92□□□□□ -0.98
CCDC113-205ENST00000569374 TMEM240Q5SV17 173 aa8.92□□□□□ -0.98
CCDC113-205ENST00000569374 GALNT18Q6P9A2 607 aa8.92□□□□□ -0.98
CCDC113-205ENST00000569374 FRMD7Q6ZUT3 714 aa8.92□□□□□ -0.98
CCDC113-205ENST00000569374 SPPL2CQ8IUH8 684 aa8.92□□□□□ -0.98
CCDC113-205ENST00000569374 NOSTRINQ8IVI9 506 aa8.92□□□□□ -0.98
CCDC113-205ENST00000569374 C1orf162Q8NEQ5 155 aaPredicted RBP8.92□□□□□ -0.98
CCDC113-205ENST00000569374 UHMK1Q8TAS1 419 aaKnown RBP8.92□□□□□ -0.98
CCDC113-205ENST00000569374 PIP4K2CQ8TBX8 421 aa8.92□□□□□ -0.98
CCDC113-205ENST00000569374 PLEKHO2Q8TD55 490 aa8.92□□□□□ -0.98
CCDC113-205ENST00000569374 CCDC17Q96LX7 622 aa8.92□□□□□ -0.98
CCDC113-205ENST00000569374 ELF4Q99607 663 aaPredicted RBP8.92□□□□□ -0.98
CCDC113-205ENST00000569374 NAPBQ9H115 298 aa8.92□□□□□ -0.98
CCDC113-205ENST00000569374 RAVER2Q9HCJ3 691 aaKnown RBP8.92□□□□□ -0.98
CCDC113-205ENST00000569374 LMBRD1Q9NUN5 540 aa8.92□□□□□ -0.98
CCDC113-205ENST00000569374 CLIP2Q9UDT6 1046 aa8.92□□□□□ -0.98
CCDC113-205ENST00000569374 KCNG1Q9UIX4 513 aa8.92□□□□□ -0.98
CCDC113-205ENST00000569374 ZNF536O15090 1300 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 MYADML2A6NDP7 307 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 MAN2B1O00754 1011 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 SCDO00767 359 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 TPD52L2O43399 206 aaKnown RBP8.91□□□□□ -0.98
CCDC113-205ENST00000569374 ZFYP08048 801 aaPredicted RBP8.91□□□□□ -0.98
CCDC113-205ENST00000569374 HOXC6P09630 235 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 PDCP20941 246 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 TFAP4Q01664 338 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 KRT32Q14532 448 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 TMEM63BQ5T3F8 832 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 GJC2Q5T442 439 aaPredicted RBP8.91□□□□□ -0.98
CCDC113-205ENST00000569374 SNRNP48Q6IEG0 339 aaKnown RBP8.91□□□□□ -0.98
CCDC113-205ENST00000569374 CC2D1AQ6P1N0 951 aaPredicted RBP8.91□□□□□ -0.98
CCDC113-205ENST00000569374 CEP128Q6ZU80 1094 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 KCTD1Q719H9 257 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 CPXCR1Q8N123 301 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 LPAR1Q92633 364 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 ASIC4Q96FT7 647 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 MAML3Q96JK9 1138 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 SLF1Q9BQI6 1058 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 MTA3Q9BTC8 594 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 G6PC3Q9BUM1 346 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 ALDH8A1Q9H2A2 487 aaPredicted RBP8.91□□□□□ -0.98
CCDC113-205ENST00000569374 CPVLQ9H3G5 476 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 C11orf49Q9H6J7 331 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 CARS2Q9HA77 564 aaKnown RBP8.91□□□□□ -0.98
CCDC113-205ENST00000569374 SP110Q9HB58 689 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 PDLIM7Q9NR12 457 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 KCNH7Q9NS40 1196 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 MTMR4Q9NYA4 1195 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 NYAP2Q9P242 653 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 DDX20Q9UHI6 824 aaKnown RBP8.91□□□□□ -0.98
CCDC113-205ENST00000569374 B3GALT1Q9Y5Z6 326 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 CYP46A1Q9Y6A2 500 aa8.91□□□□□ -0.98
CCDC113-205ENST00000569374 BAZ2BQ9UIF8 2168 aaKnown RBP8.9□□□□□ -0.98
CCDC113-205ENST00000569374 FRMPD2Q68DX3 1309 aaPredicted RBP8.9□□□□□ -0.98
CCDC113-205ENST00000569374 GOLGA8AA7E2F4 631 aa8.9□□□□□ -0.98
CCDC113-205ENST00000569374 GOLGA8BA8MQT2 603 aa8.9□□□□□ -0.98
CCDC113-205ENST00000569374 NKRFO15226 690 aaKnown RBP eCLIP8.9□□□□□ -0.98
CCDC113-205ENST00000569374 SCAND1P57086 179 aa8.9□□□□□ -0.98
CCDC113-205ENST00000569374 CCNA1P78396 465 aa8.9□□□□□ -0.98
CCDC113-205ENST00000569374 MINDY4Q4G0A6 757 aa8.9□□□□□ -0.98
CCDC113-205ENST00000569374 STEAP3Q658P3 488 aa8.9□□□□□ -0.98
CCDC113-205ENST00000569374 CPA6Q8N4T0 437 aa8.9□□□□□ -0.98
CCDC113-205ENST00000569374 OXR1Q8N573 874 aa8.9□□□□□ -0.98
CCDC113-205ENST00000569374 FAM184AQ8NB25 1140 aa8.9□□□□□ -0.98
CCDC113-205ENST00000569374 SHCBP1Q8NEM2 672 aa8.9□□□□□ -0.98
CCDC113-205ENST00000569374 PHOSPHO1Q8TCT1 267 aa8.9□□□□□ -0.98
CCDC113-205ENST00000569374 ACAP3Q96P50 834 aa8.9□□□□□ -0.98
CCDC113-205ENST00000569374 ALPK1Q96QP1 1244 aa8.9□□□□□ -0.98
CCDC113-205ENST00000569374 PPP1R9BQ96SB3 815 aa8.9□□□□□ -0.98
CCDC113-205ENST00000569374 ZDHHC5Q9C0B5 715 aa8.9□□□□□ -0.98
CCDC113-205ENST00000569374 LSG1Q9H089 658 aaKnown RBP8.9□□□□□ -0.98
CCDC113-205ENST00000569374 USP36Q9P275 1121 aaKnown RBP8.9□□□□□ -0.98
CCDC113-205ENST00000569374 COL6A3P12111 3177 aa8.9□□□□□ -0.98
CCDC113-205ENST00000569374 SCN5AQ14524 2016 aa8.9□□□□□ -0.99
CCDC113-205ENST00000569374 CCDC171Q6TFL3 1326 aa8.89□□□□□ -0.99
CCDC113-205ENST00000569374 KLHL33A6NCF5 533 aa8.89□□□□□ -0.99
CCDC113-205ENST00000569374 PRR19A6NJB7 356 aa8.89□□□□□ -0.99
CCDC113-205ENST00000569374 FGAP02671 866 aa8.89□□□□□ -0.99
CCDC113-205ENST00000569374 TSPY3P0CV98 308 aa8.89□□□□□ -0.99
CCDC113-205ENST00000569374 TSPY8P0CW00 308 aa8.89□□□□□ -0.99
CCDC113-205ENST00000569374 HSPD1P10809 573 aaKnown RBP8.89□□□□□ -0.99
CCDC113-205ENST00000569374 GNAT2P19087 354 aa8.89□□□□□ -0.99
CCDC113-205ENST00000569374 SLC16A2P36021 539 aa8.89□□□□□ -0.99
CCDC113-205ENST00000569374 MAGEA10P43363 369 aaPredicted RBP8.89□□□□□ -0.99
CCDC113-205ENST00000569374 SLC6A11P48066 632 aa8.89□□□□□ -0.99
CCDC113-205ENST00000569374 CNTN2Q02246 1040 aa8.89□□□□□ -0.99
CCDC113-205ENST00000569374 ZNF792Q3KQV3 632 aa8.89□□□□□ -0.99
CCDC113-205ENST00000569374 ZSCAN23Q3MJ62 389 aa8.89□□□□□ -0.99
CCDC113-205ENST00000569374 HSF5Q4G112 596 aaPredicted RBP8.89□□□□□ -0.99
CCDC113-205ENST00000569374 MUM1L1Q5H9M0 696 aa8.89□□□□□ -0.99
CCDC113-205ENST00000569374 RRP12Q5JTH9 1297 aaKnown RBP8.89□□□□□ -0.99
CCDC113-205ENST00000569374 SLFN13Q68D06 897 aa8.89□□□□□ -0.99
CCDC113-205ENST00000569374 LRSAM1Q6UWE0 723 aa8.89□□□□□ -0.99
CCDC113-205ENST00000569374 CWC27Q6UX04 472 aaKnown RBP8.89□□□□□ -0.99
CCDC113-205ENST00000569374 DPP9Q86TI2 863 aa8.89□□□□□ -0.99
CCDC113-205ENST00000569374 TRIM48Q8IWZ4 208 aa8.89□□□□□ -0.99
CCDC113-205ENST00000569374 FERMT2Q96AC1 680 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms