RNA–Protein interactions for RNA: ENST00000569335.1

HERC2-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-211ENST00000569335 CYP26B1Q9NR63 512 aa7.04□□□□□ -1.28
HERC2-211ENST00000569335 PSD3Q9NYI0 1048 aa7.04□□□□□ -1.28
HERC2-211ENST00000569335 DNAJC12Q9UKB3 198 aa7.04□□□□□ -1.28
HERC2-211ENST00000569335 TFR2Q9UP52 801 aa7.04□□□□□ -1.28
HERC2-211ENST00000569335 SYNGAP1Q96PV0 1343 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 ANKRD62A6NC57 917 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 DDX3YO15523 660 aaKnown RBP7.03□□□□□ -1.28
HERC2-211ENST00000569335 SRGAP2O75044 1071 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 PALMO75781 387 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 ALX3O95076 343 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 MYCLP12524 364 aaPredicted RBP7.03□□□□□ -1.28
HERC2-211ENST00000569335 MAPK1P28482 360 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 CNGA1P29973 690 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 ARL2P36404 184 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 ACTR2P61160 394 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 CBX1P83916 185 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 POU5F1Q01860 360 aaKnown RBP7.03□□□□□ -1.28
HERC2-211ENST00000569335 APBA1Q02410 837 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 GCNT1Q02742 428 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 PPP3CAQ08209 521 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 DMTNQ08495 405 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 GPS2Q13227 327 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 GRM1Q13255 1194 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 VGLL4Q14135 290 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 DRAP1Q14919 205 aaPredicted RBP7.03□□□□□ -1.28
HERC2-211ENST00000569335 TERF2Q15554 542 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 TARBP2Q15633 366 aaKnown RBP7.03□□□□□ -1.28
HERC2-211ENST00000569335 PPP2R5EQ16537 467 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 XKR9Q5GH70 373 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 TCERG1LQ5VWI1 586 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 KRT39Q6A163 491 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 EMBQ6PCB8 327 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 VN1R5Q7Z5H4 357 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 ERO1BQ86YB8 467 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 RHOT2Q8IXI1 618 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 FAM71AQ8IYT1 594 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 MREGQ8N565 214 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 C1orf131Q8NDD1 294 aaKnown RBP7.03□□□□□ -1.28
HERC2-211ENST00000569335 LNX1Q8TBB1 728 aaPredicted RBP7.03□□□□□ -1.28
HERC2-211ENST00000569335 AENQ8WTP8 325 aaKnown RBP7.03□□□□□ -1.28
HERC2-211ENST00000569335 COG1Q8WTW3 980 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 SCFD2Q8WU76 684 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 SLC7A3Q8WY07 619 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 SHC3Q92529 594 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 CAVIN3Q969G5 261 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 ALKBH8Q96BT7 664 aaKnown RBP7.03□□□□□ -1.28
HERC2-211ENST00000569335 HES6Q96HZ4 224 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 CBWD1Q9BRT8 395 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 TMEM117Q9H0C3 514 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 MRPL18Q9H0U6 180 aaKnown RBP7.03□□□□□ -1.28
HERC2-211ENST00000569335 PORCNQ9H237 461 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 ACBD3Q9H3P7 528 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 GDF3Q9NR23 364 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 HOMER2Q9NSB8 354 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 GABBR1Q9UBS5 961 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 AJAP1Q9UKB5 411 aaPredicted RBP7.03□□□□□ -1.28
HERC2-211ENST00000569335 SAMM50Q9Y512 469 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 LRRC37A2A6NM11 1700 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 KIAA1217Q5T5P2 1943 aa7.03□□□□□ -1.28
HERC2-211ENST00000569335 EMSYQ7Z589 1322 aa7.02□□□□□ -1.28
HERC2-211ENST00000569335 MYH10P35580 1976 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 OTOFQ9HC10 1997 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 DNAJC25-GNG10A0A024R161 153 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 IGKV6-21A0A0C4DH24 114 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 DENND3A2RUS2 1198 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 CCDC188H7C350 402 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 DDX39AO00148 427 aaKnown RBP7.02□□□□□ -1.29
HERC2-211ENST00000569335 SLC16A4O15374 487 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 SEC31AO94979 1220 aaKnown RBP7.02□□□□□ -1.29
HERC2-211ENST00000569335 WISP1O95388 367 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 LDHAP00338 332 aaKnown RBP7.02□□□□□ -1.29
HERC2-211ENST00000569335 TFRCP02786 760 aaKnown RBP7.02□□□□□ -1.29
HERC2-211ENST00000569335 NAMPTP43490 491 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 MXI1P50539 228 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 CYP2J2P51589 502 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 ALDH5A1P51649 535 aaPredicted RBP7.02□□□□□ -1.29
HERC2-211ENST00000569335 PEX3P56589 373 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 PRKCEQ02156 737 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 CYP24A1Q07973 514 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 PPIL2Q13356 520 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 NEDD9Q14511 834 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 SMC1AQ14683 1233 aaKnown RBP7.02□□□□□ -1.29
HERC2-211ENST00000569335 CASP8Q14790 479 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 PSMD6Q15008 389 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 R3HDM1Q15032 1099 aaKnown RBP7.02□□□□□ -1.29
HERC2-211ENST00000569335 RPS6KA1Q15418 735 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 SNRNP35Q16560 246 aaKnown RBP7.02□□□□□ -1.29
HERC2-211ENST00000569335 RSPO4Q2I0M5 234 aaPredicted RBP7.02□□□□□ -1.29
HERC2-211ENST00000569335 NKAPLQ5M9Q1 402 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 SLFN12LQ6IEE8 588 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 C11orf63Q6NUN7 778 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 PPP1R2P3Q6NXS1 205 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 NFRKBQ6P4R8 1299 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 SLC39A4Q6P5W5 647 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 USP50Q70EL3 339 aaPredicted RBP7.02□□□□□ -1.29
HERC2-211ENST00000569335 ZNF677Q86XU0 584 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 CCNJLQ8IV13 435 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 KSR1Q8IVT5 923 aa7.02□□□□□ -1.29
HERC2-211ENST00000569335 CCDC60Q8IWA6 550 aaPredicted RBP7.02□□□□□ -1.29
HERC2-211ENST00000569335 GPD1LQ8N335 351 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms