RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 CWH43Q9H720 699 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 NRDE2Q9H7Z3 1164 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 SIX2Q9NPC8 291 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 PLCB1Q9NQ66 1216 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 CACNG4Q9UBN1 327 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 APEX2Q9UBZ4 518 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 DNAJB4Q9UDY4 337 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 AGAP1Q9UPQ3 857 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 DAAM1Q9Y4D1 1078 aa11.22□□□□□ -0.61
CDH3-210ENST00000569117 VWA8A3KMH1 1905 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 RANBP2P49792 3224 aaKnown RBP11.21□□□□□ -0.61
CDH3-210ENST00000569117 TLL1O43897 1013 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 LRRN2O75325 713 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 KIF4AO95239 1232 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 LAG3P18627 525 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 SLC9A1P19634 815 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 PAX3P23760 479 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 AARSP49588 968 aaKnown RBP eCLIP11.21□□□□□ -0.61
CDH3-210ENST00000569117 TAF6P49848 677 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 KLK7P49862 253 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 MLLT1Q03111 559 aaPredicted RBP11.21□□□□□ -0.61
CDH3-210ENST00000569117 MYO1EQ12965 1108 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 SPECC1LQ69YQ0 1117 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 DPY19L2P1Q6NXN4 242 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.21□□□□□ -0.61
CDH3-210ENST00000569117 EHBP1Q8NDI1 1231 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 C3orf58Q8NDZ4 430 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 IQCDQ96DY2 449 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 HPDLQ96IR7 371 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 FAXDC2Q96IV6 333 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 NT5C1BQ96P26 610 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 PI4K2AQ9BTU6 479 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 LSM14BQ9BX40 385 aaKnown RBP11.21□□□□□ -0.61
CDH3-210ENST00000569117 TTYH3Q9C0H2 523 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 NIF3L1Q9GZT8 377 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 GANQ9H2C0 597 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 PRO3102Q9H379 93 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 FBXL5Q9UKA1 691 aa11.21□□□□□ -0.61
CDH3-210ENST00000569117 R3HCC1Q9Y3T6 440 aaKnown RBP11.21□□□□□ -0.61
CDH3-210ENST00000569117 MRPL42Q9Y6G3 142 aaKnown RBP11.21□□□□□ -0.61
CDH3-210ENST00000569117 PLXNA4Q9HCM2 1894 aa11.21□□□□□ -0.62
CDH3-210ENST00000569117 B3GAT3O94766 335 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 ADCY5O95622 1261 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 GALTP07902 379 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 CFHP08603 1231 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 LINC00271P0C7V0 271 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 ASPAP45381 313 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 OR1G1P47890 313 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 SLC11A1P49279 550 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 BCAR1P56945 870 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 LILRA4P59901 499 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 TNNC1P63316 161 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 GCNT1Q02742 428 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 TRIM14Q14142 442 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 PTPN21Q16825 1174 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 FIGNQ5HY92 759 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 ZNF667Q5HYK9 610 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 WDR44Q5JSH3 913 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 FAM109BQ6ICB4 259 aaPredicted RBP11.2□□□□□ -0.62
CDH3-210ENST00000569117 SPOPLQ6IQ16 392 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 DCLRE1AQ6PJP8 1040 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 TDHQ8IZJ6 230 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 FIBCD1Q8N539 461 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 NEK11Q8NG66 645 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 CLP1Q92989 425 aaKnown RBP11.2□□□□□ -0.62
CDH3-210ENST00000569117 FAM81BQ96LP2 452 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 ZNF558Q96NG5 402 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 APOBEC3GQ9HC16 384 aaKnown RBP11.2□□□□□ -0.62
CDH3-210ENST00000569117 FAM207AQ9NSI2 230 aaPredicted RBP11.2□□□□□ -0.62
CDH3-210ENST00000569117 MARCH5Q9NX47 278 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 GDAP2Q9NXN4 497 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 NUB1Q9Y5A7 615 aa11.2□□□□□ -0.62
CDH3-210ENST00000569117 LCHNA4D1U4 455 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 KPNA7A9QM74 516 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 F8W810 466 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 NRP1O14786 923 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 EPHB6O15197 1021 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 NOL4O94818 638 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 CLSTN1O94985 981 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 ITGB1P05556 798 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 P4HA1P13674 534 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 UCHL3P15374 230 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 TRIM21P19474 475 aaKnown RBP11.19□□□□□ -0.62
CDH3-210ENST00000569117 TBXAS1P24557 533 aaPredicted RBP11.19□□□□□ -0.62
CDH3-210ENST00000569117 PPM1AP35813 382 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 APBA1Q02410 837 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 CUL2Q13617 745 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 WDR72Q3MJ13 1102 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 KLHDC7AQ5VTJ3 777 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 PHLDB3Q6NSJ2 640 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 KCNT2Q6UVM3 1135 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 CD300LGQ6UXG3 332 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 ENOSF1Q7L5Y1 443 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 LIMS2Q7Z4I7 341 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 ARHGEF19Q8IW93 802 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 SLC39A11Q8N1S5 342 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 PPM1KQ8N3J5 372 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 COLGALT1Q8NBJ5 622 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 JAKMIP2Q96AA8 810 aa11.19□□□□□ -0.62
CDH3-210ENST00000569117 NUP58Q9BVL2 599 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms