RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 hCG_1984214I3L0E3 225 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 ARHGAP33O14559 1287 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 ASAP2O43150 1006 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 PSMD10O75832 226 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 P2RY2P41231 377 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 CLCNKBP51801 687 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 L1TD1Q5T7N2 865 aaKnown RBP12.39□□□□□ -0.43
CDH3-208ENST00000569036 TRIM68Q6AZZ1 485 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 B3GNT9Q6UX72 402 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 KRT25Q7Z3Z0 450 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 IFNLR1Q8IU57 520 aaPredicted RBP12.39□□□□□ -0.43
CDH3-208ENST00000569036 ZNF713Q8N859 430 aaPredicted RBP12.39□□□□□ -0.43
CDH3-208ENST00000569036 FRMD1Q8N878 549 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 FANCBQ8NB91 859 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 TCP11Q8WWU5 503 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 P2RY13Q9BPV8 354 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 FAM83CQ9BQN1 747 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 EBF3Q9H4W6 596 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 THG1LQ9NWX6 298 aaKnown RBP12.39□□□□□ -0.43
CDH3-208ENST00000569036 DNMT3LQ9UJW3 386 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 FBXL5Q9UKA1 691 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 YIPF1Q9Y548 306 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 STK24Q9Y6E0 443 aa12.39□□□□□ -0.43
CDH3-208ENST00000569036 A0A1B0GUA9 196 aa12.38□□□□□ -0.43
CDH3-208ENST00000569036 HIP1O00291 1037 aa12.38□□□□□ -0.43
CDH3-208ENST00000569036 SH2B2O14492 632 aaPredicted RBP12.38□□□□□ -0.43
CDH3-208ENST00000569036 TBX3O15119 743 aa12.38□□□□□ -0.43
CDH3-208ENST00000569036 TRAPPC3O43617 180 aa12.38□□□□□ -0.43
CDH3-208ENST00000569036 CBFA2T3O75081 653 aa12.38□□□□□ -0.43
CDH3-208ENST00000569036 RECQL4O94761 1208 aa12.38□□□□□ -0.43
CDH3-208ENST00000569036 RFC5P40937 340 aa12.38□□□□□ -0.43
CDH3-208ENST00000569036 PSMC5P62195 406 aa12.38□□□□□ -0.43
CDH3-208ENST00000569036 PSMD2Q13200 908 aa12.38□□□□□ -0.43
CDH3-208ENST00000569036 EMC2Q15006 297 aa12.38□□□□□ -0.43
CDH3-208ENST00000569036 GPR158Q5T848 1215 aa12.38□□□□□ -0.43
CDH3-208ENST00000569036 CASC1Q6TDU7 716 aa12.38□□□□□ -0.43
CDH3-208ENST00000569036 GAREM2Q75VX8 874 aa12.38□□□□□ -0.43
CDH3-208ENST00000569036 GPR155Q7Z3F1 870 aa12.38□□□□□ -0.43
CDH3-208ENST00000569036 EXOC8Q8IYI6 725 aa12.38□□□□□ -0.43
CDH3-208ENST00000569036 SPACA7Q96KW9 195 aa12.38□□□□□ -0.43
CDH3-208ENST00000569036 CEP170P1Q96L14 293 aa12.38□□□□□ -0.43
CDH3-208ENST00000569036 DNAJC25Q9H1X3 360 aa12.38□□□□□ -0.43
CDH3-208ENST00000569036 AFF4Q9UHB7 1163 aaKnown RBP12.38□□□□□ -0.43
CDH3-208ENST00000569036 CIZ1Q9ULV3 898 aaPredicted RBP12.38□□□□□ -0.43
CDH3-208ENST00000569036 B8ZZF3 427 aa12.37□□□□□ -0.43
CDH3-208ENST00000569036 PRC1O43663 620 aa12.37□□□□□ -0.43
CDH3-208ENST00000569036 EDIL3O43854 480 aa12.37□□□□□ -0.43
CDH3-208ENST00000569036 DKK1O94907 266 aa12.37□□□□□ -0.43
CDH3-208ENST00000569036 ARSAP15289 507 aa12.37□□□□□ -0.43
CDH3-208ENST00000569036 WEE1P30291 646 aa12.37□□□□□ -0.43
CDH3-208ENST00000569036 EIF2S3P41091 472 aaKnown RBP12.37□□□□□ -0.43
CDH3-208ENST00000569036 AMPD2Q01433 879 aa12.37□□□□□ -0.43
CDH3-208ENST00000569036 FUT2Q10981 343 aa12.37□□□□□ -0.43
CDH3-208ENST00000569036 UPP1Q16831 310 aa12.37□□□□□ -0.43
CDH3-208ENST00000569036 SPDYCQ5MJ68 293 aa12.37□□□□□ -0.43
CDH3-208ENST00000569036 LMBRD2Q68DH5 695 aaPredicted RBP12.37□□□□□ -0.43
CDH3-208ENST00000569036 MICU3Q86XE3 530 aa12.37□□□□□ -0.43
CDH3-208ENST00000569036 PDCD7Q8N8D1 485 aaKnown RBP12.37□□□□□ -0.43
CDH3-208ENST00000569036 SMG9Q9H0W8 520 aaKnown RBP12.37□□□□□ -0.43
CDH3-208ENST00000569036 TOR4AQ9NXH8 423 aa12.37□□□□□ -0.43
CDH3-208ENST00000569036 PCOLCE2Q9UKZ9 415 aa12.37□□□□□ -0.43
CDH3-208ENST00000569036 TBX20Q9UMR3 447 aa12.37□□□□□ -0.43
CDH3-208ENST00000569036 PPME1Q9Y570 386 aa12.37□□□□□ -0.43
CDH3-208ENST00000569036 FAM149AA5PLN7 773 aa12.36□□□□□ -0.43
CDH3-208ENST00000569036 H7C4K7 107 aa12.36□□□□□ -0.43
CDH3-208ENST00000569036 ERVH48-1M5A8F1 160 aa12.36□□□□□ -0.43
CDH3-208ENST00000569036 CAPSQ13938 189 aa12.36□□□□□ -0.43
CDH3-208ENST00000569036 MRPL58Q14197 206 aaKnown RBP12.36□□□□□ -0.43
CDH3-208ENST00000569036 RNF19BQ6ZMZ0 732 aa12.36□□□□□ -0.43
CDH3-208ENST00000569036 LRRC69Q6ZNQ3 347 aa12.36□□□□□ -0.43
CDH3-208ENST00000569036 RABEPKQ7Z6M1 372 aa12.36□□□□□ -0.43
CDH3-208ENST00000569036 TTC30AQ86WT1 665 aa12.36□□□□□ -0.43
CDH3-208ENST00000569036 REXO1Q8N1G1 1221 aaKnown RBP12.36□□□□□ -0.43
CDH3-208ENST00000569036 TMTC2Q8N394 836 aa12.36□□□□□ -0.43
CDH3-208ENST00000569036 MTA3Q9BTC8 594 aa12.36□□□□□ -0.43
CDH3-208ENST00000569036 SEMA4CQ9C0C4 833 aa12.36□□□□□ -0.43
CDH3-208ENST00000569036 ATXN3LQ9H3M9 355 aa12.36□□□□□ -0.43
CDH3-208ENST00000569036 GOLGA2P5Q9HBQ8 144 aa12.36□□□□□ -0.43
CDH3-208ENST00000569036 MAFFQ9ULX9 164 aa12.36□□□□□ -0.43
CDH3-208ENST00000569036 SLC12A7Q9Y666 1083 aa12.36□□□□□ -0.43
CDH3-208ENST00000569036 V9GY48 417 aaPredicted RBP12.36□□□□□ -0.43
CDH3-208ENST00000569036 NOTCH2Q04721 2471 aa12.36□□□□□ -0.43
CDH3-208ENST00000569036 NBPF19A0A087WUL8 3843 aa12.36□□□□□ -0.43
CDH3-208ENST00000569036 ZNF638Q14966 1978 aaKnown RBP12.36□□□□□ -0.43
CDH3-208ENST00000569036 RELNP78509 3460 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 TLX3O43711 291 aaPredicted RBP12.35□□□□□ -0.43
CDH3-208ENST00000569036 SYPP08247 313 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 HNRNPLP14866 589 aaKnown RBP eCLIP12.35□□□□□ -0.43
CDH3-208ENST00000569036 GJA4P35212 333 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 CSRP3P50461 194 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 PTH1RQ03431 593 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 POU5F1BQ06416 359 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 TFDP1Q14186 410 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 MXD4Q14582 209 aaPredicted RBP12.35□□□□□ -0.43
CDH3-208ENST00000569036 MAP7D1Q3KQU3 841 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 CTXN3Q4LDR2 81 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 ARHGAP15Q53QZ3 475 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 TAF1BQ53T94 588 aaPredicted RBP12.35□□□□□ -0.43
CDH3-208ENST00000569036 GLRA4Q5JXX5 417 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 COLEC12Q5KU26 742 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms