RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 TTC8Q8TAM2 541 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 BPIFB1Q8TDL5 484 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 ZFYVE19Q96K21 471 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 TMEM209Q96SK2 561 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 TCHPQ9BT92 498 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 TARS2Q9BW92 718 aaKnown RBP13.61□□□□□ -0.23
SNX29-207ENST00000568949 BHMT2Q9H2M3 363 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 POLD4Q9HCU8 107 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 ARHGAP28Q9P2N2 729 aa13.61□□□□□ -0.23
SNX29-207ENST00000568949 KIF26AQ9ULI4 1882 aaPredicted RBP13.61□□□□□ -0.23
SNX29-207ENST00000568949 ATG2BQ96BY7 2078 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 EML5Q05BV3 1969 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 CCDC169A6NNP5 214 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 MEFVO15553 781 aaPredicted RBP13.6□□□□□ -0.23
SNX29-207ENST00000568949 OR52Z1P0C646 297 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 MPLP40238 635 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 NPTX2P47972 431 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 AARSP49588 968 aaKnown RBP eCLIP13.6□□□□□ -0.23
SNX29-207ENST00000568949 PEX3P56589 373 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
SNX29-207ENST00000568949 ORC2Q13416 577 aaPredicted RBP13.6□□□□□ -0.23
SNX29-207ENST00000568949 COL9A2Q14055 689 aaPredicted RBP13.6□□□□□ -0.23
SNX29-207ENST00000568949 TRIM29Q14134 588 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 ITPRIPL2Q3MIP1 535 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 ARHGAP15Q53QZ3 475 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 GPR158Q5T848 1215 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 RNF43Q68DV7 783 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 CENPPQ6IPU0 288 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 PSAPL1Q6NUJ1 521 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 UNQ6494/PRO21346Q6UXR6 183 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 TAS1R3Q7RTX0 852 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 DNAJB7Q7Z6W7 309 aaPredicted RBP13.6□□□□□ -0.23
SNX29-207ENST00000568949 GPIHBP1Q8IV16 184 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 CAMKK1Q8N5S9 505 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 KDF1Q8NAX2 398 aaPredicted RBP13.6□□□□□ -0.23
SNX29-207ENST00000568949 PGLYRP2Q96PD5 576 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 CRISPLD1Q9H336 500 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 ATXN3LQ9H3M9 355 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 THG1LQ9NWX6 298 aaKnown RBP13.6□□□□□ -0.23
SNX29-207ENST00000568949 SLC8A2Q9UPR5 921 aa13.6□□□□□ -0.23
SNX29-207ENST00000568949 RBM19Q9Y4C8 960 aaKnown RBP13.6□□□□□ -0.23
SNX29-207ENST00000568949 CENPBP07199 599 aaPredicted RBP13.59□□□□□ -0.23
SNX29-207ENST00000568949 GABRR2P28476 465 aa13.59□□□□□ -0.23
SNX29-207ENST00000568949 LRPAP1P30533 357 aa13.59□□□□□ -0.23
SNX29-207ENST00000568949 PXNP49023 591 aaPredicted RBP13.59□□□□□ -0.23
SNX29-207ENST00000568949 MCM2P49736 904 aa13.59□□□□□ -0.23
SNX29-207ENST00000568949 GRSF1Q12849 480 aaKnown RBP eCLIP13.59□□□□□ -0.23
SNX29-207ENST00000568949 DMP1Q13316 513 aaPredicted RBP13.59□□□□□ -0.23
SNX29-207ENST00000568949 MYBPC2Q14324 1141 aa13.59□□□□□ -0.23
SNX29-207ENST00000568949 ANKRD1Q15327 319 aa13.59□□□□□ -0.23
SNX29-207ENST00000568949 SLC10A6Q3KNW5 377 aa13.59□□□□□ -0.23
SNX29-207ENST00000568949 TMEM196Q5HYL7 178 aa13.59□□□□□ -0.23
SNX29-207ENST00000568949 PKN3Q6P5Z2 889 aa13.59□□□□□ -0.23
SNX29-207ENST00000568949 USP37Q86T82 979 aa13.59□□□□□ -0.23
SNX29-207ENST00000568949 ITIH5Q86UX2 942 aa13.59□□□□□ -0.23
SNX29-207ENST00000568949 PSMG2Q969U7 264 aa13.59□□□□□ -0.23
SNX29-207ENST00000568949 TASP1Q9H6P5 420 aa13.59□□□□□ -0.23
SNX29-207ENST00000568949 KMT5AQ9NQR1 393 aa13.59□□□□□ -0.23
SNX29-207ENST00000568949 HSFX1Q9UBD0 423 aa13.59□□□□□ -0.23
SNX29-207ENST00000568949 ZMIZ1Q9ULJ6 1067 aa13.59□□□□□ -0.23
SNX29-207ENST00000568949 IGF2RP11717 2491 aa13.59□□□□□ -0.23
SNX29-207ENST00000568949 ZFYVE26Q68DK2 2539 aa13.59□□□□□ -0.23
SNX29-207ENST00000568949 FASNP49327 2511 aaKnown RBP13.58□□□□□ -0.23
SNX29-207ENST00000568949 C1QTNF9BB2RNN3 333 aa13.58□□□□□ -0.24
SNX29-207ENST00000568949 TOM1L1O75674 476 aa13.58□□□□□ -0.24
SNX29-207ENST00000568949 PRAMEF12O95522 483 aa13.58□□□□□ -0.24
SNX29-207ENST00000568949 OR4Q2P0C623 313 aa13.58□□□□□ -0.24
SNX29-207ENST00000568949 C1QTNF9P0C862 333 aa13.58□□□□□ -0.24
SNX29-207ENST00000568949 TYMPP19971 482 aa13.58□□□□□ -0.24
SNX29-207ENST00000568949 CCT6AP40227 531 aaKnown RBP13.58□□□□□ -0.24
SNX29-207ENST00000568949 NOVA1P51513 510 aaKnown RBP13.58□□□□□ -0.24
SNX29-207ENST00000568949 TNK2Q07912 1038 aa13.58□□□□□ -0.24
SNX29-207ENST00000568949 ECM1Q16610 540 aa13.58□□□□□ -0.24
SNX29-207ENST00000568949 PLK5Q496M5 336 aa13.58□□□□□ -0.24
SNX29-207ENST00000568949 FSTL4Q6MZW2 842 aa13.58□□□□□ -0.24
SNX29-207ENST00000568949 DAW1Q8N136 415 aa13.58□□□□□ -0.24
SNX29-207ENST00000568949 SMOC1Q9H4F8 434 aa13.58□□□□□ -0.24
SNX29-207ENST00000568949 C17orf75Q9HAS0 396 aa13.58□□□□□ -0.24
SNX29-207ENST00000568949 PLEKHA5Q9HAU0 1116 aa13.58□□□□□ -0.24
SNX29-207ENST00000568949 TUBGCP4Q9UGJ1 667 aa13.58□□□□□ -0.24
SNX29-207ENST00000568949 ZMYM5Q9UJ78 669 aa13.58□□□□□ -0.24
SNX29-207ENST00000568949 TIMM13Q9Y5L4 95 aaPredicted RBP13.58□□□□□ -0.24
SNX29-207ENST00000568949 MTMR11A4FU01 709 aa13.57□□□□□ -0.24
SNX29-207ENST00000568949 TMEM8BA6NDV4 472 aa13.57□□□□□ -0.24
SNX29-207ENST00000568949 TRDMT1O14717 391 aaKnown RBP13.57□□□□□ -0.24
SNX29-207ENST00000568949 RHOBTB1O94844 696 aa13.57□□□□□ -0.24
SNX29-207ENST00000568949 HARSP12081 509 aaKnown RBP13.57□□□□□ -0.24
SNX29-207ENST00000568949 CYP3A5P20815 502 aa13.57□□□□□ -0.24
SNX29-207ENST00000568949 CDC25CP30307 473 aa13.57□□□□□ -0.24
SNX29-207ENST00000568949 AMPD2Q01433 879 aa13.57□□□□□ -0.24
SNX29-207ENST00000568949 NOLC1Q14978 699 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNX29-207ENST00000568949 ELF2Q15723 593 aa13.57□□□□□ -0.24
SNX29-207ENST00000568949 ZBTB6Q15916 424 aa13.57□□□□□ -0.24
SNX29-207ENST00000568949 ATAD1Q8NBU5 361 aa13.57□□□□□ -0.24
SNX29-207ENST00000568949 NSUN7Q8NE18 718 aaKnown RBP13.57□□□□□ -0.24
SNX29-207ENST00000568949 GTF3C6Q969F1 213 aa13.57□□□□□ -0.24
SNX29-207ENST00000568949 ZBTB45Q96K62 511 aaPredicted RBP13.57□□□□□ -0.24
SNX29-207ENST00000568949 DRC1Q96MC2 740 aa13.57□□□□□ -0.24
SNX29-207ENST00000568949 FAM83CQ9BQN1 747 aa13.57□□□□□ -0.24
SNX29-207ENST00000568949 NTPCRQ9BSD7 190 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms