RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 MTMR12Q9C0I1 747 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 HERC5Q9UII4 1024 aaKnown RBP9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 CNOT7Q9UIV1 285 aaKnown RBP9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 MAGED2Q9UNF1 606 aaPredicted RBP9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 NUB1Q9Y5A7 615 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 NHSQ6T4R5 1651 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 GJB1P08034 283 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 RFX1P22670 979 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 HMGCS2P54868 508 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 DRG2P55039 364 aaKnown RBP9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 GSCP56915 257 aaPredicted RBP9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 TAF1BQ53T94 588 aaPredicted RBP9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 ANKRD22Q5VYY1 191 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 BSPRYQ5W0U4 402 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 SAMD7Q7Z3H4 446 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 MTDHQ86UE4 582 aaKnown RBP9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 SCYL3Q8IZE3 742 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 ANKRD35Q8N283 1001 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 LRRC71Q8N4P6 559 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 CLEC4DQ8WXI8 215 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 IMPG2Q9BZV3 1241 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 KIAA1586Q9HCI6 787 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 PIH1D1Q9NWS0 290 aaKnown RBP9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 WHRNQ9P202 907 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 ARMCX1Q9P291 453 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 GRID1Q9ULK0 1009 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 C15orf41Q9Y2V0 281 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 PCDHA10Q9Y5I2 948 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 ZNF536O15090 1300 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 UBE4BO95155 1302 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 CDK5RAP2Q96SN8 1893 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 K7ERI5 159 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 LGR5O75473 907 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 PROSCO94903 275 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 NR3C2P08235 984 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 GHRP10912 638 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 ATP2A2P16615 1042 aaKnown RBP9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 GDF10P55107 478 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 MAMLD1Q13495 774 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 ISLR2Q6UXK2 745 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 DLK2Q6UY11 383 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 USP37Q86T82 979 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 FAM160B2Q86V87 743 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 PALM2Q8IXS6 379 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 MAML1Q92585 1016 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 CENPTQ96BT3 561 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 GINS2Q9Y248 185 aa9.47□□□□□ -0.89
HDGFL3-206ENST00000568294 BHMG1C9JSJ3 638 aaPredicted RBP9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 GRIN3BO60391 1043 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 CD48P09326 243 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 GBP1P32455 592 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 FSTL1Q12841 308 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 ALCAMQ13740 583 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 PTK6Q13882 451 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 TAF5Q15542 800 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 NAIF1Q69YI7 327 aaPredicted RBP9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 SCYL2Q6P3W7 929 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 APBB1IPQ7Z5R6 666 aaPredicted RBP9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 TRIM50Q86XT4 487 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 RFX6Q8HWS3 928 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 PYROXD1Q8WU10 500 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 FAM151AQ8WW52 585 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 RSAD2Q8WXG1 361 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 MIEF2Q96C03 454 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 PRR11Q96HE9 360 aaPredicted RBP9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 ZNF570Q96NI8 536 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 NUDCD1Q96RS6 583 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 IWS1Q96ST2 819 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 FBXO6Q9NRD1 293 aaPredicted RBP9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 SLC17A7Q9P2U7 560 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 GGA2Q9UJY4 613 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 TRPC5Q9UL62 973 aaPredicted RBP9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 PCDHB2Q9Y5E7 798 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 MYPNQ86TC9 1320 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 KAT6AQ92794 2004 aa9.46□□□□□ -0.89
HDGFL3-206ENST00000568294 AVILO75366 819 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 CST3P01034 146 aaPredicted RBP9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 ASNSP08243 561 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 PSMA2P25787 234 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 IVDP26440 423 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 CDH8P55286 799 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 IGBP1P78318 339 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 TRAF1Q13077 416 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 CUL2Q13617 745 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 SPARCL1Q14515 664 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 CLUL1Q15846 466 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 GPAT2Q6NUI2 795 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 MAP4K3Q8IVH8 894 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 FAM71DQ8N9W8 422 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 C3orf20Q8ND61 904 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 PPP1R13LQ8WUF5 828 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 TRIM56Q9BRZ2 755 aaKnown RBP9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 MAK16Q9BXY0 300 aaKnown RBP9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 KCND2Q9NZV8 630 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 ZNF541Q9H0D2 1346 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 CST8O60676 142 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 FAM155BO75949 473 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 MYL6P60660 151 aa9.46□□□□□ -0.9
HDGFL3-206ENST00000568294 TRPC3Q13507 836 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms