RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 NUCB2P80303 420 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 ROR1Q01973 937 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 CREMQ03060 361 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 RAB33AQ14088 237 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 KYAT1Q16773 422 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 CNNM4Q6P4Q7 775 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 KRBA2Q6ZNG9 492 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 GRASPQ7Z6J2 395 aaPredicted RBP10.28□□□□□ -0.76
SF3B3-211ENST00000568291 KIAA0895Q8NCT3 520 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 OR5B17Q8NGF7 314 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 HDAC7Q8WUI4 952 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 CCDC127Q96BQ5 260 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 SENP8Q96LD8 212 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 PGLYRP2Q96PD5 576 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 TBC1D17Q9HA65 648 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 AGPAT3Q9NRZ7 376 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 EXOC1Q9NV70 894 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 HCFC1R1Q9NWW0 138 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 ZDHHC7Q9NXF8 308 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 CA14Q9ULX7 337 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 AGAP1Q9UPQ3 857 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 NOTCH4Q99466 2003 aa10.28□□□□□ -0.76
SF3B3-211ENST00000568291 OTOGLQ3ZCN5 2332 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 A0A1W2PQ27 194 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 A0A1W2PQ64 194 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 A0A1W2PQD8 194 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 ANO9A1A5B4 782 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 WDR27A2RRH5 827 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 KRBA1A5PL33 1030 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 PIRO00625 290 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 HCRTO43612 131 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 TBC1D4O60343 1298 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 GADD45BO75293 160 aaPredicted RBP10.27□□□□□ -0.77
SF3B3-211ENST00000568291 ZMYND10O75800 440 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 ITGB3P05106 788 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 KRT19P08727 400 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 SRFP11831 508 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 GARTP22102 1010 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 POLR2BP30876 1174 aaKnown RBP10.27□□□□□ -0.77
SF3B3-211ENST00000568291 ABCD1P33897 745 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 CASP4P49662 377 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 PNOCQ13519 176 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 ALCAMQ13740 583 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 MRPL58Q14197 206 aaKnown RBP10.27□□□□□ -0.77
SF3B3-211ENST00000568291 PPM1LQ5SGD2 360 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 RNF19BQ6ZMZ0 732 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 ANKS3Q6ZW76 656 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 STXBP4Q6ZWJ1 553 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 BRSK2Q8IWQ3 736 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 CD302Q8IX05 232 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 SMYD4Q8IYR2 804 aaPredicted RBP10.27□□□□□ -0.77
SF3B3-211ENST00000568291 ADSSL1Q8N142 457 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 GPD1LQ8N335 351 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 CSGALNACT2Q8N6G5 542 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 NXPE3Q969Y0 559 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 PYM1Q9BRP8 204 aaKnown RBP10.27□□□□□ -0.77
SF3B3-211ENST00000568291 PRKD2Q9BZL6 878 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 MTMR12Q9C0I1 747 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 PLEKHA4Q9H4M7 779 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 ASB7Q9H672 318 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 MAGEF1Q9HAY2 307 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 CYP4F11Q9HBI6 524 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 WNT16Q9UBV4 365 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 FBXW11Q9UKB1 542 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 PCDHB8Q9UN66 801 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 SLC27A5Q9Y2P5 690 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 BACE2Q9Y5Z0 518 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 COL4A3Q01955 1670 aa10.27□□□□□ -0.77
SF3B3-211ENST00000568291 PDCD11Q14690 1871 aaKnown RBP10.27□□□□□ -0.77
SF3B3-211ENST00000568291 MYH11P35749 1972 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 FAM237AA0A1B0GTK4 181 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 GOLGA6L4A6NEF3 574 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 M0QZQ0 153 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 NRG2O14511 850 aaPredicted RBP10.26□□□□□ -0.77
SF3B3-211ENST00000568291 CYB561D2O14569 222 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 SYN3O14994 580 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 EIF3DO15371 548 aaKnown RBP eCLIP10.26□□□□□ -0.77
SF3B3-211ENST00000568291 XPOTO43592 962 aaKnown RBP10.26□□□□□ -0.77
SF3B3-211ENST00000568291 SOAT2O75908 522 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 IL18RAPO95256 599 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 PAPLNO95428 1278 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 C1RP00736 705 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 DLATP10515 647 aaKnown RBP10.26□□□□□ -0.77
SF3B3-211ENST00000568291 CPB1P15086 417 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 YWHAHQ04917 246 aaPredicted RBP10.26□□□□□ -0.77
SF3B3-211ENST00000568291 ADCY1Q08828 1119 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 DPYDQ12882 1025 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 HTR4Q13639 388 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 CCDC142Q17RM4 750 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 KNOP1Q1ED39 458 aaKnown RBP10.26□□□□□ -0.77
SF3B3-211ENST00000568291 LIN9Q5TKA1 542 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 WSCD1Q658N2 575 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 ISM2Q6H9L7 571 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 USP37Q86T82 979 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 GPR65Q8IYL9 337 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 SLC44A3Q8N4M1 653 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 TTC9BQ8N6N2 239 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 C1orf127Q8N9H9 656 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 ZNF461Q8TAF7 563 aa10.26□□□□□ -0.77
SF3B3-211ENST00000568291 GPR152Q8TDT2 470 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms