RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 GOLPH3Q9H4A6 298 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 JPH1Q9HDC5 661 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 PICK1Q9NRD5 415 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 HOXC10Q9NYD6 342 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 TAS2R14Q9NYV8 317 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 NOP53Q9NZM5 478 aaKnown RBP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 SLC9A2Q9UBY0 812 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 AJAP1Q9UKB5 411 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-250ENST00000568290 SLC12A4Q9UP95 1085 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 PTPN22Q9Y2R2 807 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 STARD13Q9Y3M8 1113 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 STYXL1Q9Y6J8 313 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 IKBKGQ9Y6K9 419 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 USH1CQ9Y6N9 552 aa8.09□□□□□ -1.11
ATXN3-250ENST00000568290 EXOC1LA0A1B0GW35 172 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 TMEM120BA0PK00 339 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 MOXD2PA6NHM9 499 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 PHF20L1A8MW92 1017 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 BACH1O14867 736 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 SPTLC1O15269 473 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 TLR3O15455 904 aaKnown RBP8.08□□□□□ -1.12
ATXN3-250ENST00000568290 CLDN3O15551 220 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 PRPF4O43172 522 aaKnown RBP eCLIP8.08□□□□□ -1.12
ATXN3-250ENST00000568290 GJB6O95452 261 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 NR3C2P08235 984 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 CHRNB2P17787 502 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 EIF4BP23588 611 aaKnown RBP8.08□□□□□ -1.12
ATXN3-250ENST00000568290 FLT3P36888 993 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 ITGA8P53708 1063 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 ARL4CP56559 192 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 GSCP56915 257 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-250ENST00000568290 RPS6P62753 249 aaKnown RBP8.08□□□□□ -1.12
ATXN3-250ENST00000568290 UBXN2AP68543 259 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 TRPC3Q13507 836 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 CUL2Q13617 745 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 TRADDQ15628 312 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 SGSM1Q2NKQ1 1148 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 FAM182BQ5T319 152 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 IZUMO3Q5VZ72 239 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 NUGGCQ68CJ6 796 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 PLEKHA7Q6IQ23 1121 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 HIBCHQ6NVY1 386 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-250ENST00000568290 DNAJC24Q6P3W2 148 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 MAEAQ7L5Y9 396 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 SLC47A2Q86VL8 602 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 THNSL1Q8IYQ7 743 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 LRRC34Q8IZ02 419 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 AGGF1Q8N302 714 aaeCLIP8.08□□□□□ -1.12
ATXN3-250ENST00000568290 CHST13Q8NET6 341 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 LRRC8CQ8TDW0 803 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 SH3TC2Q8TF17 1288 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 C7orf43Q8WVR3 580 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 PSPC1Q8WXF1 523 aaKnown RBP8.08□□□□□ -1.12
ATXN3-250ENST00000568290 CLEC4DQ8WXI8 215 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 KRT35Q92764 455 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 INPP5DQ92835 1189 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 HAUS1Q96CS2 278 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 KLHL29Q96CT2 875 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 UIMC1Q96RL1 719 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 TGS1Q96RS0 853 aaKnown RBP8.08□□□□□ -1.12
ATXN3-250ENST00000568290 CGRRF1Q99675 332 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 FERMT1Q9BQL6 677 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 PITPNM3Q9BZ71 974 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 RABEP2Q9H5N1 569 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 ACAD9Q9H845 621 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 ERVK-5Q9HDB9 667 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 CYP26B1Q9NR63 512 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 ARHGAP28Q9P2N2 729 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 GABBR1Q9UBS5 961 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 TPX2Q9ULW0 747 aaKnown RBP8.08□□□□□ -1.12
ATXN3-250ENST00000568290 CNTN6Q9UQ52 1028 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 ZNF148Q9UQR1 794 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 PCDHB4Q9Y5E5 795 aa8.08□□□□□ -1.12
ATXN3-250ENST00000568290 IQANK1A0A1B0GTG1 560 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 CFAP69A5D8W1 941 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 SMIM23A6NLE4 172 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 RASA4BC9J798 803 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 ANKRD65E5RJM6 399 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 DNALI1O14645 258 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-250ENST00000568290 TM9SF1O15321 606 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 MAGEB2O15479 319 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 RASA4O43374 803 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 C21orf2O43822 256 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 HLA-DRAP01903 254 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 TNNC2P02585 160 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 ITGAVP06756 1048 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 GSTA2P09210 222 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 TGFB3P10600 412 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 NQO1P15559 274 aaKnown RBP8.07□□□□□ -1.12
ATXN3-250ENST00000568290 KRT15P19012 456 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 EIF2AK2P19525 551 aaKnown RBP8.07□□□□□ -1.12
ATXN3-250ENST00000568290 FGFR4P22455 802 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 STIP1P31948 543 aaKnown RBP8.07□□□□□ -1.12
ATXN3-250ENST00000568290 MAGEA4P43358 317 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 DLG4P78352 724 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 NFX1Q12986 1120 aaKnown RBP8.07□□□□□ -1.12
ATXN3-250ENST00000568290 TFDP1Q14186 410 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 MXD4Q14582 209 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-250ENST00000568290 ZNF268Q14587 947 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-250ENST00000568290 MTFR1Q15390 333 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms