RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 WEE2P0C1S8 567 aa23.31■■□□□ 1.32
NME3-210ENST00000567271 MORC3Q14149 939 aa23.31■■□□□ 1.32
NME3-210ENST00000567271 CAMK4Q16566 473 aa23.31■■□□□ 1.32
NME3-210ENST00000567271 EDRF1Q3B7T1 1238 aa23.31■■□□□ 1.32
NME3-210ENST00000567271 ATAT1Q5SQI0 421 aa23.31■■□□□ 1.32
NME3-210ENST00000567271 OVOS1Q6IE37 1185 aa23.31■■□□□ 1.32
NME3-210ENST00000567271 C15orf39Q6ZRI6 1047 aa23.31■■□□□ 1.32
NME3-210ENST00000567271 ADHFE1Q8IWW8 467 aa23.31■■□□□ 1.32
NME3-210ENST00000567271 ZNF461Q8TAF7 563 aa23.31■■□□□ 1.32
NME3-210ENST00000567271 RIPOR3Q96MK2 946 aa23.31■■□□□ 1.32
NME3-210ENST00000567271 MTCL1Q9Y4B5 1905 aaKnown RBP23.31■■□□□ 1.32
NME3-210ENST00000567271 CCDC195A0A1B0GUA6 201 aa23.3■■□□□ 1.32
NME3-210ENST00000567271 WDR27A2RRH5 827 aa23.3■■□□□ 1.32
NME3-210ENST00000567271 LRRIQ3A6PVS8 624 aaPredicted RBP23.3■■□□□ 1.32
NME3-210ENST00000567271 ZMYND10O75800 440 aa23.3■■□□□ 1.32
NME3-210ENST00000567271 BMP6P22004 513 aa23.3■■□□□ 1.32
NME3-210ENST00000567271 MTHFRP42898 656 aa23.3■■□□□ 1.32
NME3-210ENST00000567271 ARPP19P56211 112 aa23.3■■□□□ 1.32
NME3-210ENST00000567271 ZP2Q05996 745 aa23.3■■□□□ 1.32
NME3-210ENST00000567271 BFSP1Q12934 665 aa23.3■■□□□ 1.32
NME3-210ENST00000567271 NECTIN4Q96NY8 510 aa23.3■■□□□ 1.32
NME3-210ENST00000567271 PHF7Q9BWX1 381 aaPredicted RBP23.3■■□□□ 1.32
NME3-210ENST00000567271 ZDHHC7Q9NXF8 308 aa23.3■■□□□ 1.32
NME3-210ENST00000567271 R3HCC1Q9Y3T6 440 aaKnown RBP23.3■■□□□ 1.32
NME3-210ENST00000567271 NCOR1O75376 2440 aa23.3■■□□□ 1.32
NME3-210ENST00000567271 OR6C75A6NL08 312 aa23.29■■□□□ 1.32
NME3-210ENST00000567271 DLL1O00548 723 aa23.29■■□□□ 1.32
NME3-210ENST00000567271 CST3P01034 146 aaPredicted RBP23.29■■□□□ 1.32
NME3-210ENST00000567271 AP3M2P53677 418 aa23.29■■□□□ 1.32
NME3-210ENST00000567271 MYO1EQ12965 1108 aa23.29■■□□□ 1.32
NME3-210ENST00000567271 STIM1Q13586 685 aa23.29■■□□□ 1.32
NME3-210ENST00000567271 LIN9Q5TKA1 542 aa23.29■■□□□ 1.32
NME3-210ENST00000567271 WSCD1Q658N2 575 aa23.29■■□□□ 1.32
NME3-210ENST00000567271 TPGS2Q68CL5 300 aa23.29■■□□□ 1.32
NME3-210ENST00000567271 CYP26C1Q6V0L0 522 aa23.29■■□□□ 1.32
NME3-210ENST00000567271 METTL23Q86XA0 190 aa23.29■■□□□ 1.32
NME3-210ENST00000567271 TMC2Q8TDI7 906 aa23.29■■□□□ 1.32
NME3-210ENST00000567271 ZNF707Q96C28 371 aaPredicted RBP23.29■■□□□ 1.32
NME3-210ENST00000567271 HPDLQ96IR7 371 aa23.29■■□□□ 1.32
NME3-210ENST00000567271 RHOBTB2Q9BYZ6 727 aa23.29■■□□□ 1.32
NME3-210ENST00000567271 GDAP2Q9NXN4 497 aa23.29■■□□□ 1.32
NME3-210ENST00000567271 KIAA1468Q9P260 1216 aa23.29■■□□□ 1.32
NME3-210ENST00000567271 C19orf67A6NJJ6 358 aa23.28■■□□□ 1.32
NME3-210ENST00000567271 BIN1O00499 593 aa23.28■■□□□ 1.32
NME3-210ENST00000567271 C8AP07357 584 aa23.28■■□□□ 1.32
NME3-210ENST00000567271 ATF2P15336 505 aa23.28■■□□□ 1.32
NME3-210ENST00000567271 CD44P16070 742 aaKnown RBP23.28■■□□□ 1.32
NME3-210ENST00000567271 PSMC2P35998 433 aaKnown RBP23.28■■□□□ 1.32
NME3-210ENST00000567271 PPP1R2P41236 205 aa23.28■■□□□ 1.32
NME3-210ENST00000567271 PMS1P54277 932 aaKnown RBP23.28■■□□□ 1.32
NME3-210ENST00000567271 DLG4P78352 724 aa23.28■■□□□ 1.32
NME3-210ENST00000567271 UVSSAQ2YD98 709 aa23.28■■□□□ 1.32
NME3-210ENST00000567271 ANKRD40Q6AI12 368 aa23.28■■□□□ 1.32
NME3-210ENST00000567271 DHTKD1Q96HY7 919 aaPredicted RBP23.28■■□□□ 1.32
NME3-210ENST00000567271 TSG101Q99816 390 aa23.28■■□□□ 1.32
NME3-210ENST00000567271 PRKD2Q9BZL6 878 aa23.28■■□□□ 1.32
NME3-210ENST00000567271 POMKQ9H5K3 350 aa23.28■■□□□ 1.32
NME3-210ENST00000567271 CUL9Q8IWT3 2517 aa23.28■■□□□ 1.32
NME3-210ENST00000567271 MUC3AQ02505 3323 aa23.27■■□□□ 1.32
NME3-210ENST00000567271 PPP1R3GB7ZBB8 358 aa23.27■■□□□ 1.32
NME3-210ENST00000567271 PSMA7O14818 248 aa23.27■■□□□ 1.32
NME3-210ENST00000567271 CETN3O15182 167 aa23.27■■□□□ 1.32
NME3-210ENST00000567271 C4BPAP04003 597 aaKnown RBP23.27■■□□□ 1.32
NME3-210ENST00000567271 PPM1LQ5SGD2 360 aa23.27■■□□□ 1.32
NME3-210ENST00000567271 INTS8Q75QN2 995 aaKnown RBP23.27■■□□□ 1.32
NME3-210ENST00000567271 RTL10Q7L3V2 364 aa23.27■■□□□ 1.32
NME3-210ENST00000567271 FAM186BQ8IYM0 893 aa23.27■■□□□ 1.32
NME3-210ENST00000567271 GJD3Q8N144 294 aa23.27■■□□□ 1.32
NME3-210ENST00000567271 SLC7A14Q8TBB6 771 aa23.27■■□□□ 1.32
NME3-210ENST00000567271 RTP3Q9BQQ7 232 aa23.27■■□□□ 1.32
NME3-210ENST00000567271 CLSTN2Q9H4D0 955 aa23.27■■□□□ 1.32
NME3-210ENST00000567271 CD320Q9NPF0 282 aa23.27■■□□□ 1.32
NME3-210ENST00000567271 AFF4Q9UHB7 1163 aaKnown RBP23.27■■□□□ 1.32
NME3-210ENST00000567271 L1RE1Q9UN81 338 aa23.27■■□□□ 1.32
NME3-210ENST00000567271 SNX9Q9Y5X1 595 aa23.27■■□□□ 1.32
NME3-210ENST00000567271 BDP1A6H8Y1 2624 aa23.27■■□□□ 1.32
NME3-210ENST00000567271 IKBKBO14920 756 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 HUS1O60921 280 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 HNRNPA1P09651 372 aaKnown RBP eCLIP23.26■■□□□ 1.31
NME3-210ENST00000567271 CPB1P15086 417 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 CCNE1P24864 410 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 ELF1P32519 619 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 VAMP7P51809 220 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 MCCD1P59942 119 aaPredicted RBP23.26■■□□□ 1.31
NME3-210ENST00000567271 LRRC63Q05C16 580 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 ENPEPQ07075 957 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 GPR17Q13304 367 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 C1orf220Q5T0J3 134 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 TDRD10Q5VZ19 366 aaKnown RBP23.26■■□□□ 1.31
NME3-210ENST00000567271 RNF19BQ6ZMZ0 732 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 CCDC149Q6ZUS6 474 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 ZC3H3Q8IXZ2 948 aaKnown RBP23.26■■□□□ 1.31
NME3-210ENST00000567271 TCEAL8Q8IYN2 117 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 THEM5Q8N1Q8 247 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 PDCL2Q8N4E4 241 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 TOP6BLQ8N6T0 577 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 TRIML1Q8N9V2 468 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 OR10T2Q8NGX3 314 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 SMG7Q92540 1137 aaKnown RBP23.26■■□□□ 1.31
NME3-210ENST00000567271 EEF2KMTQ96G04 330 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms